Paroceanicella profunda: FDP22_15435
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Entry
FDP22_15435 CDS
T06319
Name
(GenBank) AAA family ATPase
KO
K14414
transcriptional regulatory protein RtcR
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppru03000
]
FDP22_15435
Transcription factors [BR:
ppru03000
]
Prokaryotic type
Other transcription factors
Others
FDP22_15435
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_22
NACHT
MCM
bpMoxR
AAA_19
AAA_16
AAA_7
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
QDL93053
UniProt:
A0A5B8G311
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All DBs
Position
3475315..3476877
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AA seq
520 aa
AA seq
DB search
MKNVVIGFLGTKLDMGRKRRWRPTPGLATNGQFHIDRLEILFDREYDRLAHRVRSEVEAA
SPGTEVLLRDFDLADPWDFQEVYGKLFDFARAYGFDEDRERYHVHLTTGTHVAQICWFLL
TESRHIPARLIQTGPPGPGESAPRLDIIDLDLSRYNALQQRFDQLSRAYSDQLKGGIETR
NAAYNALIDRIELVASASDEPILLLGETGTGKTELAERIHALKLDRRRVKGRMVHVNCAT
LRGPDAMAALFGQRRGHTGVAGSERNGLLREADGGVLFLDEVDELGLGEQAVLLHAIESG
RFYPLGSDHEVSSRFRILSGASRDLRALGAAGAFRPDLLARLGMWSFRLPPMRERREDIE
PNLAFELARAERQLGTRVGFNTDARARYLTFASDPATAWPGNFRDFGASVRRLCTLAPRG
RITRSMVEEEIATLVTDWGTATSDADQRLVRDLLGEAAGDVDPFDVVQLAHVLRICRQSP
SLSAAGRSLFAASRSRKSTQNDADRLRKYLARFGLAWGAL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacgttgtgatcggcttcctcggcaccaagctggacatgggccggaagaggcgc
tggcgccccacccccggcctcgccaccaacggccagttccacatcgaccggctcgagatc
ctgttcgacagggagtacgaccgcctcgcgcaccgggtccggtccgaggtggaggcggcg
tctcccggtaccgaggtgctgctgcgcgatttcgacctcgcggacccctgggatttccag
gaggtctacggaaagctgttcgacttcgcccgtgcctacgggttcgacgaggaccgggag
cgttaccatgtccacctcaccaccggcacgcatgtggcgcagatctgctggttcctgctc
accgagagccggcacatccccgcgcggctcatccagaccgggccgccgggcccgggggag
agcgcgcccaggctcgatatcatcgacctggacctgagccgctacaacgcgctccagcag
cgcttcgaccagctgtcgcgcgcctacagcgaccagttgaagggcggcatcgagacccgc
aacgccgcctacaacgccctgatcgaccggatcgagctggtggctagcgcgtccgacgag
ccgatcctgctgctgggtgagaccggcacgggcaagacggaactggccgagcgcatccac
gccctcaagctggaccgccgccgcgtgaaggggcggatggtgcatgtgaactgcgccacg
ctgcgcggaccggacgccatggccgccctgttcggccagcggcgcggccacactggcgtc
gccggctccgagcgcaacgggctgctgcgcgaggcggacggcggcgtgctgttcctcgac
gaggtggacgaactcgggctcggcgagcaggcggtgctgctgcatgcgatcgagagcggg
cggttctacccgctcggctcggaccatgaggtgagcagccggttccgcatcctctccggg
gccagccgcgatctgcgcgccctcggcgcggccggcgcgttccggcccgatctcctcgcc
cgcctcggcatgtggagcttccgcctgcccccgatgcgggagcggcgggaggatatcgag
ccgaacctcgccttcgagcttgcccgggcggaacggcagctgggaacacgggtcggcttc
aacaccgatgcccgcgcgcgctacctgacgttcgcctccgacccggcaaccgcctggccc
ggcaatttccgcgacttcggcgcctcggtgcgcaggctgtgcaccctcgcgccgcgcggg
cgtatcacccgcagcatggtggaggaggaaatcgcgaccctcgtcaccgactggggcacc
gcgacctccgacgcggatcagcgcctggtccgcgacctgctcggggaggccgccggcgat
gtcgacccgttcgacgtggtccagctcgcccatgtgctgcgcatctgcaggcagtccccc
agcctgagcgcggccggccgcagcctcttcgccgcctcccgcagccggaagtcgacgcag
aatgacgcggaccggctgaggaaatacctcgcgcggttcggcctcgcatggggggccctg
tag
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