Paroceanicella profunda: FDP22_16245
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Entry
FDP22_16245 CDS
T06319
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppru03036
]
FDP22_16245
Chromosome and associated proteins [BR:
ppru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
FDP22_16245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
QDL93769
UniProt:
A0A5B8G301
LinkDB
All DBs
Position
complement(3640435..3644622)
Genome browser
AA seq
1395 aa
AA seq
DB search
MPRTFGASDATGAWDWKLAYEACEVATVLFLRKYGKALFRKAASPASRLGPLAKIAGLLP
TQTRRSEESQSFQQFSTPLPLGLAALTAAAITPADLVLEPSAGTGLMAILAQAAGGSLIL
NELAETRADLLSPLFPAFPVTRFDATQIDDYLTTDAMPSVVLMNPPFSVMANVQGRMADA
AYRHVASALARLAPGGRLVTITGTNLGPESPAWRDAFIRLQDRGRVVFTAAIDGAVFARH
GTSIDTRLTVIDKLPADDPSVFPVSAGTAPDVVTLLDWIESQLPPRLPVSLPKVASPMPA
AAPKTVRGYLARATASRPVAAPASDPEGVELTYETVDWTPPEGARLSDAIYEEYVLQSLR
IPGAEPHPTRLVQSAAMASVAPPKPSYRPMLPADICARLSDAQLETVIYAGEAHADHLAG
AWMVDEHLDNMSAAAEDAAGAVRFRRGFMLGDRTGAGKGRQSAGIILDNWLRGRRKAVWI
SKSDKLIEDAQRDWSALGMERLLVTPLLRFPQGATITLSEGILFTTYATLRSDERGEKVS
RVKQIVEWLGWDFDGVIIFDESHAMQNAGGGKGDRGDIAASQQGRAGLRLQHALPDARVV
YVSATGATTVHNLAYAQRLGLWGGEDFPFQTRAGFVEAIEAGGVAAMEVLARDLRSLGLY
TARSLSYDGVEYELIEHQLTDEQRHIYDSYAAAFAVIHGNLDAAMEAANITGSEGTLNRQ
AKSAARSAFESTKQRFFGHLLTSMKTPTLIRSIDADLAAGHAAVIQIVSTGEALMERRLA
EIPTEEWNDISVDVTPREYVGSYLQHSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESREA
VARRNEMLEQLGSLPPVPGALDQIVQRFGTDMVAEVTGRSRRIVRKGDGASARLAVENRA
PSANLAETSAFMDDQKRILVFSDAGGTGRSYHADLSARNQRLRVHYLLEPGWKADAAIQG
LGRTNRTNQAQPPQFRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDN
LESAYARDALRQLYLAVVRSKVEGCSLERFESATGLKLMDANGIKDDLPPIATFLNRLLA
LTIELQGILFSAFEQLLQARIDGAIASGTYDMGLETLRAESFIVTVRQVIHTHSGTGAET
RLLTLTERKRNQPVTLDAALAELDDPRARLLINERSGRAAVQIPTTSVMLDDGEIERRVR
LIRPMEAMNIPVRVIGETHWIEAERADFATVWNAELAEVPEFTDSILHMVTGLLLPIWKR
LPQDSSRVYRLQTDEGERIIGRRVSQAWATNASTSGVASCLTPDAAYAALNEGRTILDLA
EGLQLRRVRVMGANRIELTGFTDTRRERLRAYGLFSEIISWKLRFFVPVGASGPEIIGKL
LDRFPVERISERGAA
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
ataccgcggaccttcggcgcgtccgacgccaccggcgcctgggactggaagctcgcctat
gaggcctgcgaggtcgccacggttctgttcctgcgcaaatacggaaaggcgctgttccgc
aaagccgcctccccggcgtcccggctcggtcctctggcgaagatcgcggggttactaccg
acgcagacccgccgctcagaggaaagccagagcttccagcagttcagcacacctctgcct
ctcggccttgccgccctgaccgcggccgcgatcacgccggccgatttggtgctggagcct
tcggccggcaccggcctgatggcgatcctggcacaggctgccggcggctcgctgatcctc
aacgagcttgccgagacccgcgccgatcttctctcgcccctctttccggcctttcccgtc
acccggttcgacgccacccagatcgacgactatctgaccacggacgccatgccgtccgtg
gttctgatgaacccacctttctcggtcatggccaatgtccagggacggatggcggatgct
gcgtatcgtcatgtcgcctcggcgctggcccggctcgctcccggcggacggctggtcacg
atcaccgggacgaacttaggaccggaatcaccagcctggcgcgacgccttcatacgcctg
caggaccgcggccgcgtggtcttcaccgcggccatcgacggagcggtcttcgccaggcat
ggcaccagcatcgacacgcggctgacggtgatcgacaagctgcccgccgacgatccgtca
gtcttcccggtctcggcaggaaccgcacccgacgttgtcacgctgctcgactggatcgaa
agccagcttccgccgcgcttgccggtctcgctgccgaaggtcgcttctcccatgccggcg
gctgccccgaagaccgtgcgcgggtatctcgctcgcgccacagcgtcccgacctgtcgca
gcaccggcgtccgatccggagggcgtcgagctaacctacgagaccgtggactggacgcca
ccggaaggcgctcgcctgtccgatgcgatctatgaggaatatgtactgcaatcgctgcgc
atccccggcgccgagccgcacccgaccaggctggtgcaatccgctgccatggcctcggtt
gcaccgccaaaaccgtcctaccggcccatgctgcccgcggacatctgcgcgcggctgtcg
gacgcccagcttgagacggtgatctatgccggcgaagcccatgccgatcatctggctggc
gcctggatggtggatgagcatctcgacaacatgagcgccgccgccgaggatgctgccggc
gcggtccgtttccgccggggcttcatgctcggtgaccgtaccggtgctggcaaggggcgc
cagtcggccggcatcatcctcgacaactggctgcgcggccgccgcaaggcggtctggatc
tccaaatccgacaagctgatcgaggacgcgcaacgcgactggtcggcgctcggcatggag
cgactgctggtaacgccactcttgcgcttccctcaaggcgcaacgatcacgctgtcggaa
ggcatcctgttcaccacctatgccacgctgcgctccgatgagcggggcgagaaggtttcg
cgcgtgaagcagatcgtcgaatggttgggctgggacttcgatggggtcatcatcttcgac
gaaagccatgctatgcagaatgccggtggcggcaagggagaccgcggtgatatcgccgcc
tcgcagcagggacgcgcaggcctgcggctccagcatgccctgccggatgcgcgcgtggtc
tatgtctcggcaaccggggccaccacggttcacaatctcgcctatgcacaacggctcggc
ctctggggtggcgaggatttcccgtttcagacccgcgccgggtttgtcgaggcgatcgag
gccggcggcgtggcggccatggaagtgctggcccgcgatctgcgatctctcggcctctat
accgcccgctcactctcctatgatggcgtcgaatatgaactgatcgagcatcagctcacg
gacgaacagcggcacatctacgattcatatgctgccgccttcgctgtcattcatgggaac
ctggacgcggcgatggaggcggccaatatcaccggcagtgaaggcacgttgaaccgccaa
gctaaatccgccgcgcggtcggccttcgaaagcaccaagcagcgtttcttcggccatctg
ctcacttcgatgaaaaccccgacgctgatccgttcgatcgatgccgatctggcggcgggc
catgccgccgtgatccagatcgtctccaccggcgaggcgctgatggaacggcgactagcc
gagattccgaccgaggaatggaatgatatttccgtcgatgtaacaccgcgggaatatgtc
ggctcgtacttgcagcattccttcccggtgcagctctacgaacccttcaccgacagcgaa
ggcaatttgtcctcgcggcccgttttccgggacggtcagccggtcgaaagccgagaagcc
gtcgcccggcgcaatgagatgctggagcagctcgggtcgcttccgcccgtgccgggagca
ctcgaccagatcgtccagcgctttggcacggatatggtggcggaagtcacgggccgctct
cgccggatcgtgcgcaagggtgacggggcatcggcacgtcttgcggtcgagaaccgagcg
ccttctgccaatcttgccgagacttcggcctttatggatgaccagaagcgcatcctggtc
ttctctgatgccggtggcaccgggcgcagctatcacgcggacctctcagcgcggaaccag
cggctgcgggtgcattacctgctggaaccgggctggaaggccgatgccgccattcagggg
ctggggcgtaccaatcgtaccaatcaggcgcagccgccgcagttccgacccatcgccacg
gatgtcaaagccgagaagcgcttcctttcgaccatcgcccgccgccttgacacgctgggt
gcgatcacccgcggccagcgccagaccggtggccaaggcctgttccggcccgaggacaat
ctggaatctgcctatgcccgcgatgctttgcgccagctctatttggctgtagtgcgtagc
aaggttgagggatgctcgctggaaaggtttgaatccgccaccggcctgaagctgatggac
gcgaacggcatcaaggacgacctgccgccgatcgccaccttcctcaatcgcctgttggct
ctgaccatcgagttgcagggaatcctgttctcggccttcgagcagcttctgcaggcccgg
atcgacggggcgattgcatccggcacctatgacatggggctggagacgctgcgcgcagag
agtttcatcgtcaccgtccggcaggtgatccatacccattcgggcaccggcgcagaaacg
cggctcctgactctcaccgagcgcaaacgcaatcagccggtcacgctggatgcagccctg
gcggaactggatgatccccgcgcaagattgctcatcaacgagcgatccggtcgcgctgcc
gtacagatcccgaccaccagcgtcatgctggatgatggcgagatcgaacggcgcgtgcgg
ctgatccgacccatggaggcgatgaacattccggtgcgtgtgataggcgagacccattgg
atcgaggccgaacgtgccgacttcgccacggtctggaacgcggaactggcagaggtgccg
gagttcaccgacagcatcctgcatatggtgaccgggctcctgctgccgatctggaaacgc
ttgccgcaggactcctcgcgcgtctatcggctccagaccgacgagggcgaacgcatcatc
ggtcgccgggtctcgcaggcatgggctaccaatgcttcgaccagtggcgtcgccagctgc
ctgaccccggatgcggcctatgccgcgctgaacgaaggccgcacgatcctcgatctcgcc
gaggggctgcaactgcgccgcgtccgcgtcatgggtgccaaccggatcgaactgaccggc
ttcaccgacacgaggcgcgagcgccttcgggcctatgggctcttcagcgagatcatctcc
tggaagctacgattcttcgtgccggtgggcgcatcggggccggagatcatcggcaaactg
ctcgaccgcttcccggttgagcgcatctccgagcggggggctgcgtga
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