Paroceanicella profunda: FDP22_16960
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Entry
FDP22_16960 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02010
ABC transporters
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FDP22_16960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_16960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_16960
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FDP22_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
FIST
YfiO
Motif
Other DBs
NCBI-ProteinID:
QDL93780
UniProt:
A0A5B8G1M6
LinkDB
All DBs
Position
complement(3788032..3789207)
Genome browser
AA seq
391 aa
AA seq
DB search
MFAVAFSTLFSPQLAMAQETVKIGVVIPLSGSNAQFGANIRNGLELALKDVNGAGGIGSL
EGAKVELVYADTPEPAKAGAAVQRLVSGEKVVGIIGSFVSNITLAASEVTERLGVPMVTH
SFADQITERGYRNIFQMSPKASVLGAATFEQAIQLGEISDEKISRIAILWEDTSYGTAQS
KGIREAAEKAGVEVVVDEGYPPGITDVTPLINKLRNSGAQLVFPVSYINDAVLIIRSMGQ
QQIDTPVVGGAGGYIIPDFGTALGAMAEGVLSVAPANYDAAKQIADRYRATYGTWPSHEA
LMYAAGLEDMVKAIDVARSTDPAKIRDALSTLRFCEGFARALPTGCLAYDETGATTTGTP
IMVQWQGGELVTVFPQKAGAQLLWRGKQITE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgttgcattctcgaccctgttcagcccgcagctggccatggctcaggagacg
gtgaagattggggtcgtgatccccctgagtggctccaatgcccagtttggcgccaatatt
cgcaacgggcttgagttggcgctcaaggacgtgaacggcgcgggcggcatcggctccctc
gagggcgcgaaggtggagctggtctatgcagacacgcctgaaccggcaaaagccggcgcg
gcagtgcagcgccttgtcagcggcgagaaggtcgttggcatcatcggctccttcgtcagc
aatatcacccttgccgcttccgaagtgacggagcgcctcggcgtgcccatggtgacccac
tctttcgcggaccagatcaccgagcgggggtatcgcaacatcttccagatgtcgcccaag
gcttcggtgctcggagcagcgacgttcgagcaggcaattcaactcggcgaaatttcggat
gagaagatctccaggatcgccattctctgggaggacacatcctacggcaccgctcaatca
aagggcatccgcgaggccgcggagaaggccggagttgaggtggtggtggacgagggatat
ccgccgggcatcaccgatgtcaccccgctcatcaacaagctccgcaattccggcgcccaa
ctcgtcttcccggtctcctacatcaacgatgcggtgttgatcatacgctccatggggcag
cagcagatcgatacgcccgtcgtaggcggagcgggcggctacatcatcccggatttcgga
acagctctgggcgccatggcagagggcgtgctctccgttgccccggccaactacgacgct
gcaaagcagatcgcggatcgctatcgcgcgacctacggcacatggccctcgcacgaggcg
ctcatgtatgccgccggcctcgaggacatggtgaaggcgatcgacgtcgcaaggtcgacg
gatccagcgaagatccgcgacgcgctctccactctgcgcttctgcgagggcttcgccagg
gcgcttcccaccggctgcctcgcctatgacgagacgggcgccaccaccaccggcacgcca
atcatggtccagtggcaaggtggtgagctggtcaccgtcttcccacagaaggccggcgct
caactcctttggcgcggcaagcagatcaccgaatga
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