Paroceanicella profunda: FDP22_17530
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Entry
FDP22_17530 CDS
T06319
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02020
Two-component system
ppru02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FDP22_17530
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FDP22_17530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppru02035
]
FDP22_17530
Bacterial motility proteins [BR:
ppru02035
]
Flagellar system
Chemotaxis proteins
MCPs
FDP22_17530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP_2
HAMP
Motif
Other DBs
NCBI-ProteinID:
QDL93424
UniProt:
A0A5B8G067
LinkDB
All DBs
Position
complement(3924394..3927138)
Genome browser
AA seq
914 aa
AA seq
DB search
MRKMTMGFRTIRSRVTVALVSLALVIATTIGLSLLAFTAIERVFAHLSEERLPEMRAASN
VMISTSKLIETVTAFEAVHNQDQLAAARKAFKAQADDVATRIASPSINDSPALSGLLTKA
ASEIDDLGDAVASQIAARRAVMDLMDDLAKYSLEADEFISPRVNTANFDVLRGGQAAIGR
IGGTLAKLVDEDFSHVRLLLSTQAEMNLLTGMAVGETFSPEAALQSILRDLGLGAAERLN
GRLGPLQTSGFPEEGLSALHRILDLYDEIRNTRRFTPEQRNAFLTARRDAELVLATELDD
QIFDLTMSADAAATENEETIHALIRGQVEQIRRMLSLKASLESYVATGLRAAASTAPGEL
DAAEEVLSLAAMDLNSLSIAAGPEFIPILDGLLVAGDPQTGIPARMRTVFETEERAEALQ
ATAIDGIRQMADKVSQLNIRSMDLIAASGDAVYKQISEARSGVMVLGAIGILTALGALVM
MLRTVVRPLNDLTSATARLSTGDMSPIPSYERNAQEIASMGRSLAVFRENSLKVEELNRT
NEENERRAKEQRTAMFRDLAEGIGSVVMAASRGDFTTRVASRFEDPQIQSLADDVNTLMD
STESGIGEIRKVLAAFAKADLTYRMRADLEGAFAELREDAQSTADRLAELIGRIRDSATD
TAGRAHEIADGAGQLSSRTETQAAALQETAAAMEQMASTVRSNSESLSRAEELSSSVSNK
TEAGARAADVAVSTMAQVEKSSAQITDIITVIESISFQTNLLALNAAVEAARAGDAGKGF
AVVASEVRTLAQRSAEAASEIGKLIKQSGHQVTAGVSSVRATSAALTDISDSIRPLLAAI
ADVASAGREQAIGIEEVNQSISHMDQMTQQNSGLADQSASTALSLSQEIGELASLVTAFR
IKQDVPARTDLKVA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaatgacgatgggtttcaggacgatccgcagccgcgtgacggtggcgctcgtg
agcctcgctctggtgatcgccaccacgatcgggctcagcctgctcgcattcactgcgatc
gagcgcgtcttcgcgcatctctccgaagagcgcttgccggaaatgcgggccgcctcgaac
gtgatgatctccaccagcaagctgatcgaaaccgtcacggccttcgaagccgtccataat
caggatcagctcgccgccgcccgaaaagccttcaaggcccaggccgacgatgtcgccacc
cggatcgcgagccccagcatcaatgacagccccgcgctttccggcctgctcaccaaagcc
gcctccgagattgatgacctcggagacgccgtcgccagccagatcgccgctcgccgggca
gtcatggacctcatggacgacctggcaaaatactcgctggaggcagatgagttcatctcg
cccagggtcaacactgccaacttcgatgtgctccgcgggggtcaggccgcgatcgggcgc
atcggaggtacgctcgcgaagctggtggacgaggatttttcccacgtccgcctgctgctt
tccacccaggccgagatgaacctgctcaccggcatggccgtcggggaaaccttctcaccg
gaagccgccctgcagtccatcctgcgcgatctcggtctcggggccgccgagcgtctcaac
ggccgtcttggcccgctgcagacgtccggcttcccggaagagggcctctcggccctgcat
cgcattctcgatctctacgatgaaatccgcaacacgcgccgtttcactcccgaacagcgc
aacgccttcctcaccgcgcggcgtgacgcggagctcgtcctcgccaccgagcttgacgat
cagatcttcgacctcaccatgagcgccgatgcggcagccaccgagaacgaggaaaccatt
catgcgctgatccgggggcaggtcgagcagattcggcgcatgctcagcctcaaggcgtct
ctggaaagttacgttgccaccggcttgcgggccgcagcctccaccgctcctggcgaactc
gacgccgcggaagaggtactgtctctcgccgcgatggatctcaacagcctcagcatcgct
gcgggccccgaattcattccgatcctcgacgggctgctggtcgccggcgatccccagacc
ggcattcccgcgcggatgcggacggtttttgaaacggaagagcgggccgaagccctgcag
gccaccgctattgatggaatccggcagatggccgacaaggtcagtcagctgaacatccgc
agcatggacctcatcgccgcctccggggatgccgtgtacaagcagatctccgaagcccgc
tccggcgtgatggtgctgggcgccatcggcatactcacggccctcggcgcgctggtgatg
atgttgcgcaccgtcgtccgccccctcaacgacctcacctccgccacggcgcgtctctcc
accggagacatgagcccgatccccagctacgagcggaatgctcaagagattgccagcatg
gggcgttctctggcggttttcagggaaaattcgctcaaggttgaggagttgaaccgcacg
aacgaggagaatgagcgtcgagccaaggaacagcgcaccgcaatgttccgcgatctcgcc
gagggcatcggttccgtcgtgatggctgcctctcgaggcgacttcaccacccgggttgcc
tcaaggttcgaagacccgcagatccagtcgctggccgatgacgtgaacaccctgatggac
agcacggagtccggcatcggagaaatccgcaaggtgctggccgcctttgccaaggccgat
ctcacctaccggatgcgtgccgacctggagggagcctttgctgaactgcgcgaggacgcg
caatccacggccgacagactggccgaactcatcgggcgcatccgcgacagtgccacggat
actgccggtcgggcgcacgaaattgccgatggcgccggccaactctccagccgtactgaa
acccaggctgccgcacttcaggagaccgctgccgcgatggagcaaatggcatccactgta
cgatccaattcggaaagcctttcgcgggccgaggaattgtcgagcagcgtgtcgaacaag
actgaagcgggagcgcgcgccgcggatgtggccgtcagcacgatggcgcaagtggagaaa
agctcggcccagatcacggacattatcacggtcatcgagtcgatttctttccagaccaat
ctgcttgccctcaacgcggccgtggaagccgctcgcgccggcgatgcgggcaagggtttt
gcggtggtggcctccgaggtgcgcacgctggcccaacgctcggcggaagcggcaagcgag
atcgggaagctgatcaagcaaagcggtcaccaggtgacagccggtgtgtcgagtgtgcgg
gcaacaagtgccgcgctcactgacatctccgactccatccgcccgctgctcgctgcaatt
gcggatgtggcttcggcgggccgcgaacaggccatcgggatcgaagaggtgaaccagtcg
atctcgcatatggaccagatgacgcagcaaaattccggcctggcagatcagtccgcatcg
acagccctcagcttgtctcaggaaatcggcgaactggcatcgctggtgacagctttccgc
atcaagcaggatgtgccagcgcgcactgatctcaaagtggcatga
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