Paroceanicella profunda: FDP22_17635
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Entry
FDP22_17635 CDS
T06319
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru03030
DNA replication
ppru03410
Base excision repair
ppru03420
Nucleotide excision repair
ppru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDP22_17635 (polA)
03410 Base excision repair
FDP22_17635 (polA)
03420 Nucleotide excision repair
FDP22_17635 (polA)
03440 Homologous recombination
FDP22_17635 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppru03032
]
FDP22_17635 (polA)
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_17635 (polA)
Enzymes [BR:
ppru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDP22_17635 (polA)
DNA replication proteins [BR:
ppru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FDP22_17635 (polA)
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FDP22_17635 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDP22_17635 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
EAD9
Motif
Other DBs
NCBI-ProteinID:
QDL93444
UniProt:
A0A5B8G083
LinkDB
All DBs
Position
3950975..3953830
Genome browser
AA seq
951 aa
AA seq
DB search
MSDTSTDAAPGSLGIGPGDHLHLIDGSGFIFRAYHALPPLTRKSDGLPVGAVSGFCNMIF
KLVEDAKGPDAPTHVAVIFDYSSKTFRNEIYPQYKAQRPPAPEDLVPQFPLIRDATRAFN
LPCIEMDGYEADDIIATYADQAAAAGAKVTIISSDKDLMQLVDDRVSMLDGMKNRQITAE
EVVEKFGVRPDRVIDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDTLLARAEEIKQ
PKRRQTLIDFADQIRVSRRLVTLMRDVPVEEPIGALALREPDPQMLVDFLAQMEFRTLAT
RAAGKLGLEAPVITEAPAAPAPAAPAQAGTPDAPPPIDPAGYETVSDAAALQRWCALARA
RGHVAVDTETTSLDEMVAELVGVSLCVEAGSACYIPLGHVEGTGDLLGARSAAPGQMDRE
EALALLRDILEDDAILKIGQNLKYDLKVLARAGLRVAPIDDTMLISYALDSGLGSHGMDA
LSERHLGHKPIPIKTLLGTGKAAISFDQVPIASATPYAAEDADVTLRLWQALKPRLVRDR
LTTVYETLERPLVPVLAQMEMEGIKVDRDHLSRMSNSFAQRMAGLEAEIHELAGGAFNVG
SPKQLGEILFERMELPGGKKGKAGAWGTGADVLETLAAEGHALPARVLDWRQMSKLKSTY
TDALPTHINAETGRVHTSFSLAATTTGRLASTDPNLQNIPVRSEEGRQIREAFIAEPGNL
IVSLDYSQIELRILAEVAGIDTLKQAFREGLDIHAMTASEMFGVPIEGMDPMIRRQAKAI
NFGVIYGISAFGLSNNLRIPRGDAQDFIDRYFEKFPGIRAYMDSTVEGAKAKGYVETLFG
RRIHTPEINAKGPGAGFAKRAAINAPIQGAAADVIRRAMIRVPAALAAARLPARMLLQVH
DELLFEVPEAQVEDTISVVRGVMEGASHPAVHLDVPLVVDAGFGPNWAAAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccagcacggacgcggccccggggagcctcggcatcggccccggcgaccac
ctgcacctgatcgacggctccggcttcatcttccgcgcctaccacgcgctgccgccgctc
acccgcaagtccgacggcctgccggtgggcgcggtctcgggcttctgcaacatgatcttc
aagctggttgaagacgcgaagggcccggacgcccccacccatgtggcggtgatcttcgac
tattcctccaagaccttccgcaacgagatctacccccagtacaaggcccagcgcccgccg
gcgccggaagacctggtgccgcagttcccgctgatccgcgacgccacgcgcgccttcaac
ctgccctgcatcgagatggacggctatgaggccgacgacatcatcgccacctatgccgac
caggccgcggcggcgggcgcgaaggtgacgatcatctcgtcggacaaggacctgatgcag
ctggtcgatgaccgcgtctccatgctcgacggcatgaagaaccgccagatcaccgccgag
gaggtggtggagaaattcggcgtgcgcccggaccgggtgatcgacgtgcaggcgctggcg
ggagattcggtggacaacgtgcccggcgcgcccggcatcggcatcaagaccgcggcgctg
ctgatcaacgaatacggcgacctcgacacgctgctggcccgggcggaggagatcaagcag
cccaagcgccggcagacgctgatcgacttcgcggaccagatccgcgtctcgcgccggctg
gtgacgctcatgcgcgacgtgccggtggaggagccgatcggcgccctcgccctgcgtgaa
ccggacccgcagatgctggtcgacttcctggcgcagatggaattccgcaccctggcgacc
cgtgccgccggcaagttggggctggaggcgccggtgatcaccgaggcgccggccgccccc
gcccccgcggcaccggcacaggccggcacgcccgatgccccgcccccgatcgaccccgcc
ggctacgagaccgtctccgacgccgccgccctgcagcgctggtgcgcgctggcgcgcgcg
cgcggccatgtggcggtggacaccgagacgacgtcgctggacgagatggtggccgagctg
gtcggcgtctcgctctgcgtggaggcggggtcggcctgctacatcccgctgggccatgtg
gagggcacgggcgacctgctgggcgcgcgcagcgccgccccgggccagatggaccgcgag
gaggcgctcgccctgctgcgcgacatcctggaggacgatgcgatcctcaagatcggccag
aacctgaagtacgacctgaaggtgctggcccgggccgggctgcgcgtggctccgatcgac
gacacgatgctgatctcctacgcgctcgattccggcctcggctcccacggcatggacgcg
ctctccgagcgccacctgggccacaagccgatcccgatcaagaccctgctcggcaccgga
aaggccgccatcagcttcgaccaggtgcccatcgcctcggccacgccctacgcggcggag
gatgccgacgtcaccctgcgcctgtggcaggcgctgaaaccgcggctggtgcgcgaccgg
ctcaccaccgtctacgagacgctggagcgcccgctggtgcccgtgctcgcgcagatggag
atggagggcatcaaggtggaccgcgaccacctcagccgcatgtccaacagcttcgcccag
cgcatggccgggctggaggcggagatccacgagctcgcgggcggggcgttcaacgtgggc
tccccgaagcagcttggcgagatcctgttcgagcgcatggagctgcccggcggcaagaag
ggcaaggccggcgcctggggcaccggcgccgacgtgctggagacgctggccgccgagggg
cacgccctgcccgcgcgggtgctcgactggcggcagatgtcgaagctcaagtccacctac
accgacgcgctgcccacccatatcaacgccgagacgggccgcgtgcacacctccttcagc
ctcgcggccaccaccaccgggcgcctcgcctccaccgacccgaacctgcagaacatcccc
gtgcgctccgaggagggccggcagatccgcgaggccttcatcgccgagccgggcaacctg
atcgtgagcctcgactacagccagatcgagctgcgcatcctcgccgaggtcgcgggcatc
gacacgctcaagcaggcgttccgcgaggggctcgacatccacgccatgaccgcctcggag
atgttcggcgtgccgatcgagggcatggacccgatgatccgccgccaggccaaggcgatc
aacttcggcgtcatctacggcatctccgccttcggcctgtccaacaacctacgcattccg
cgcggcgacgcgcaggatttcatcgaccgctacttcgagaagttccccggcatccgcgcc
tacatggacagcacggtggagggcgcgaaggcaaagggatatgtggagacactgttcggc
cgtcgcatccacacgccggagatcaacgccaagggccccggggcgggcttcgccaagcgc
gcggccatcaacgccccgatccagggcgccgcggccgacgtgatccgccgcgcgatgatc
cgggtgccggcggcgctcgccgccgcccgcctgcccgcccgcatgctgctgcaggtccac
gacgaactgctgttcgaagtgcccgaggcgcaggtggaagacaccatttccgtggtccgc
ggcgtgatggagggcgcgagccacccggccgtccacctcgacgtgccgctcgtggtggac
gcgggcttcggcccgaactgggccgccgcccactga
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