Paroceanicella profunda: FDP22_17875
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Entry
FDP22_17875 CDS
T06319
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00220
Arginine biosynthesis
ppru00240
Pyrimidine metabolism
ppru00250
Alanine, aspartate and glutamate metabolism
ppru01100
Metabolic pathways
ppru01110
Biosynthesis of secondary metabolites
ppru01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FDP22_17875 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FDP22_17875 (carB)
00220 Arginine biosynthesis
FDP22_17875 (carB)
Enzymes [BR:
ppru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FDP22_17875 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
CoA_binding_2
ATP-grasp_2
HAMP_N3
Motif
Other DBs
NCBI-ProteinID:
QDL93486
UniProt:
A0A5B8FX53
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All DBs
Position
4008871..4012110
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AA seq
1079 aa
AA seq
DB search
MPKRTDISSIMIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPGM
ADATYVEPITPEVVAKIIEKERPDAILPTMGGQTGLNTALALADMGVLDKFGVELIGAKR
EAIEMAEDRKLFREAMDRIGLENPKATIANTIQECLDALEHVGLPAIIRPAYTLGGTGGG
VAYNREDYEAICRSGLDASPVSQILIDESLLGWKEFEMEVVRDTADNCIIICAIENIDPM
GVHTGDSITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVQPSTGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELDNDITKVTPASFEPTIDYVVTKIPR
FAFEKFPGAKAELTTAMKSVGEAMAIGRTFHESVQKALASMETGLSGFDEVIIPGDDRRA
AMISALTRATPDRMRIIAQAMREGLSDDDIHATTSYDPWFLARIREIVEEEARIRETGLP
TEAAGMRALKMMGFTDARLGMLTGMEEDAVRHARHALDVVAVFKRIDTCAAEFEAQTPYM
YSTYEADAMGEVECEARPSDARKVVILGGGPNRIGQGIEFDYCCCHACFALTGQGYETIM
VNCNPETVSTDYDTSDRLYFEPLTIESVMEILRVEMSNGTLHGVIVQFGGQTPLKLARAL
EAEGIPILGTTPDAIDLAEDRERFQQLLNRLGLKQPRNGIAHSAEEAFTIAHEVGYPVVI
RPSYVLGGRAMEIVREDAQLERYIREAVVVSGKSPVLIDSYLSGAVEVDVDALCDGTDVH
VAGVMEHIEEAGVHSGDSACSLPPYSLDAETIAELKRQTRAMALGLEVVGLMNVQFAIKD
GVIYVLEVNPRASRTVPFVAKAVGSPIASIAARLMAGEKLSAFELKAPETRHVAVKEAVL
PFARFPGVDTLLGPEMRSTGEVMGIDTNFSRAFLKSQMGAGVKLPAGGTVFISIKDADKG
EMILDAARTLADMGFTLLATGGTAKFLAADGIAAERINKVYEGRPNIVDRMKDGGVALVF
NTTDGTQSINDSKDIRSIALYSRIPYYTTAAGARAAARAIRNEREGGIEVLSLQEYARL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagaaccgatatctcctccatcatgatcatcggcgccggacccatcgtgatc
ggtcaggcctgcgagttcgactattccggcgcccaggcctgcaaggcgctgaaggaggaa
ggctaccgggtcatcctcgtgaactccaaccccgccaccatcatgaccgacccgggcatg
gccgatgccacctatgtggagcccatcacccccgaggtcgtcgccaagatcatcgagaag
gaacgccccgacgcgatcctgccgaccatgggcggccagaccgggctcaacaccgccctg
gcgctggccgacatgggcgtgctcgacaagttcggcgtcgagctgatcggcgccaagcgc
gaggccatcgagatggccgaggaccgcaagctcttccgcgaggcgatggaccgcatcggc
ctggagaaccccaaggccaccatcgccaacaccatccaggaatgcctcgacgcgctggag
catgtcggcctgccggccatcatccgcccggcctacaccctgggcggcaccggcggcggc
gtggcctataaccgcgaggattacgaggccatctgccgctcgggcctcgatgcctccccg
gtgagccagatcctgatcgacgagagcctgctgggctggaaggaattcgagatggaggtg
gtccgcgacaccgcggacaactgcatcatcatctgcgccatcgagaacattgacccgatg
ggcgtgcacacgggcgattccatcaccgtcgccccggccctcacgctcaccgacaaggaa
taccagatgatgcgcaacgcctcgatcgcggtgctgcgcgagatcggggtggagaccggc
ggctcgaacgtgcagttcgcggtccagccctccaccgggcgcatggtggtgatcgagatg
aacccgcgcgtctcgcgctcctcggcgctggcctccaaggccacgggcttccccatcgcc
aaggtcgccgcgaagctcgccgtgggctatacgctcgacgagctggacaacgacatcacc
aaggtgacgcccgcctccttcgagcccaccatcgactatgtcgtcaccaagatcccgcgc
tttgccttcgagaagttccccggcgccaaggccgagctcaccaccgccatgaagtcggtc
ggcgaggcgatggccatcggccgcaccttccacgaaagcgtgcagaaggcgctcgcctcg
atggaaaccggcctgtcgggcttcgacgaggtgatcatcccgggggatgaccgccgcgcc
gcgatgatctccgcactcacccgcgccacgccggaccggatgcgcatcatcgcccaggcg
atgcgcgagggcctgtcggatgacgacatccacgccaccacctcctacgacccctggttc
ctggcccgcatccgcgagatcgtcgaggaggaggcccgcatccgcgagaccggcctgccc
accgaggccgcgggcatgcgcgcgctcaagatgatgggcttcaccgatgcccggctcggc
atgctcaccggcatggaggaggacgccgtgcgccacgcccgccacgcgctcgacgtggtc
gcggtgttcaagcgcatcgacacctgcgcggccgagttcgaggcccagaccccctacatg
tattccacctatgaagccgatgcgatgggcgaggtggaatgcgaggcccggccctcggac
gcgaggaaggtcgtcatcctgggcggcgggccgaaccggatcggccagggcatcgagttc
gactactgctgctgccacgcctgtttcgccctcaccgggcagggctacgagaccatcatg
gtcaactgcaaccccgagaccgtctcgaccgactacgacacctcggaccggctctacttc
gagccgctcacgatcgaatcggtgatggagatcctgcgggtcgagatgtcgaacggcacg
ctgcacggggtgatcgtgcagttcggcggccagacgccgctgaagctggcccgcgcgctg
gaggccgagggcatcccgatcctgggcaccacgcccgacgcgatcgaccttgcggaggac
cgcgagcgcttccagcagctgctgaaccggctcggcctgaagcagccgcgcaacggcatc
gcccattccgccgaagaggccttcaccatcgcgcatgaggtcggctacccggtggtgatc
cgcccctcctacgtgctgggcggccgggcgatggagatcgtgcgcgaggatgcccagctc
gagcgctacatccgcgaggcggtggtcgtctccggcaagtctccggtgctgatcgacagc
tacctctccggcgcggtggaggtggacgtggacgcgctgtgcgacggcaccgacgtgcat
gtggccggcgtgatggagcatatcgaggaggccggcgtgcattcgggcgacagcgcctgc
tcgctgccgccctactcgctcgacgccgagaccatcgccgagctgaagcgccagacccgc
gccatggcgctggggctggaggtggtcgggctgatgaacgtgcagttcgccatcaaggac
ggggtgatctacgtgctggaggtgaacccccgcgcctcgcgcaccgtgcccttcgtggcc
aaggccgtgggctcgcccatcgcctccatcgccgcacggctgatggcgggcgagaagctc
tccgccttcgagctgaaggcgccggaaacccgccacgtggcggtgaaggaagccgtgctg
cccttcgcccgcttcccgggcgtcgacacgctgctcgggcccgagatgcgctccaccggc
gaggtgatgggcatcgacaccaacttctcgcgcgccttcctcaagagccagatgggcgcg
ggcgtgaagctgccggccggcggcaccgtgttcatctcgatcaaggacgcggacaagggc
gagatgatcctcgacgccgcgcgcaccctcgcggacatgggcttcaccctgctcgccacc
ggcggcaccgcgaagttcctcgccgcggacggcatcgcggcggagcggatcaacaaggtc
tacgaaggccggccgaacatcgtggaccggatgaaggacggcggcgtggcgctggtgttc
aacaccaccgacggcacccagtccatcaatgacagcaaggacatccgctccatcgcgctt
tactcgcgcatcccctactacaccaccgccgccggcgcgcgcgcggcggcccgcgccatc
cgcaacgagcgcgagggcggcatcgaggtgctctcgctgcaggaatacgcccggctctga
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