Paroceanicella profunda: FDP22_18805
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Entry
FDP22_18805 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_18805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_18805
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FDP22_18805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QDL93928
UniProt:
A0A5B8FJ77
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All DBs
Position
pD4M1A:complement(171246..172379)
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AA seq
377 aa
AA seq
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MTDTVDQEFRADFVEIAAHRYREGRLSRRGFIAALGALGVLPMMGRGAMAQAKELVIVNW
GGTAADVIKEVLGDTYTAATGMPVVIDGSGPSAGKIRAMVESGAVVWDVCDSGPGSAIIL
GEAGMTQEIDYSVVDKSKVIDGATWKYGVGNYVYSYVLASNPRMLGGNVPQTWEDVWNVK
DFPGMRTFRKSVRGMLESATMAMGVAPENVYETLGTQDGIDAAVDKFRQLREHIIVWGSG
SDSQNLFLQEEVSMGNIWSTRAHLLKDEMDADSFTVTFNGGVISPGVWVVPKDNPAGTEE
AMKFIAFAQDPELQVKWLELIGSGPVNPAAAALVPENLKKWNPSSPENLATQILYNDEWY
AKYQISAEEQYVDALIN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccgtcgatcaagaattccgcgccgatttcgtcgagatcgcggcgcaccgc
taccgcgagggccggctgagccgccgcggcttcatcgccgccctcggcgcgctcggcgtg
ctgccgatgatgggccggggcgccatggcccaggccaaggaactggtgatcgtgaactgg
ggcggcaccgccgccgacgtgatcaaggaagtgctgggcgacacctacaccgccgccacc
ggcatgcccgtggtgatcgacggctccggtccctccgccggcaagatccgcgcgatggtc
gagagcggcgccgtggtctgggacgtgtgcgacagcggccccggctcggccatcatcctc
ggcgaagccggcatgacccaggagatcgactactccgtcgtcgacaagtccaaggtcatc
gacggcgccacctggaagtatggcgtgggcaactacgtctattcctacgtgctggcctcc
aaccccaggatgctcggcggcaacgtgccccagacttgggaagacgtgtggaacgtgaag
gacttccccggcatgcgcaccttccgcaagtcggtgcgcggcatgctggagagcgccacc
atggccatgggtgtggcgcccgagaacgtgtacgagaccctcggcacccaggacggcatc
gacgcggcggtcgacaagttccgccagctgcgcgagcacatcatcgtctggggctcgggc
tcggacagccagaacctgttcctgcaggaagaggtgtcgatgggcaacatctggtccacc
cgcgcccacctgctcaaggacgagatggacgcagacagcttcaccgtcaccttcaacggc
ggcgtgatctcgccgggcgtctgggtggttccgaaggacaacccggccggcaccgaggaa
gcgatgaagttcatcgccttcgcgcaggacccggagcttcaggtgaagtggctcgaactg
atcggctccggcccggtgaacccggccgccgcggccctggttcccgagaacctgaagaag
tggaacccgtcctcgcccgagaacctcgcgacgcagatcctctacaacgacgaatggtac
gcgaagtaccagatctcggccgaggaacagtacgtcgacgccctgatcaactga
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