Paroceanicella profunda: FDP22_19185
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Entry
FDP22_19185 CDS
T06319
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppru03000
]
FDP22_19185
Transcription factors [BR:
ppru03000
]
Prokaryotic type
Helix-turn-helix
IclR family
FDP22_19185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
GAF
HTH_9
GAF_2
Dimerisation
HTH_DeoR
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
QDL93999
UniProt:
A0A5B8G3M4
LinkDB
All DBs
Position
pD4M1A:255443..256309
Genome browser
AA seq
288 aa
AA seq
DB search
MTTLENRSLDRGITLMEILARGGSCSLAELHAASGLPKSTIRRLLGTLIARRIVRRSLSD
GRYRINITLPMSTGAPIPPGLAGLVDLSLPLALALTRRVRWPSDIHVVDGTRMQIVESTR
PASPFHIYPGRVNRWLNIFGTASGTACLAAMSPEAVMEVHRLTEGDETWGLARFGLCVEA
YLDILAATRARGYAIRLSAYLGETVFDDGLAAIAVPLLERGRPLGALTLIWPRPHLDHAR
FASEHLDALRDTAAQICAGLDRDTARTPAPAEAAPGARRGTAASPSRG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactcgagaaccgctcgctggaccgcgggattaccctgatggagatcctcgcg
cgcggcggctcctgctcgctggcggagctgcacgccgcctcgggcctgccgaagtccacc
atccgccggctgctgggcacgctgatcgcccggcgcatcgtgcgccgctcgctgtcggac
gggcgctaccgcatcaacatcaccctgccgatgagcaccggtgcgccgattccgccgggg
ctcgccgggctggtcgacctctcgctgccgctggcgctcgccctcacccggcgggtgcgc
tggccttccgacatccatgtggtggacggcacgcggatgcagatcgtggaatccacccgc
cccgcgagcccgttccacatctaccccggccgggtgaaccgctggctgaacatcttcgga
accgcctccggcaccgcctgcctcgcggcgatgagcccggaggcggtgatggaggtccac
cgcctcacggagggggatgagacctgggggctcgcgcgcttcggcctctgcgtcgaggcc
tatctcgacatcctcgcggccacccgggcgcgcggctatgccatccgcctctcggcctat
ctgggcgagacggtgttcgacgacgggctcgcggccatcgcggtgccgttgctggagcgc
ggaaggccgctgggcgccctcacgctgatctggccgcgcccccaccttgaccacgcgcgc
ttcgcctccgagcatctcgacgccctgcgcgacaccgccgcgcagatctgcgccgggctt
gaccgggacaccgcacgcaccccggcgcccgccgaggcggcgccgggtgcgcggcgcggg
accgcggcttccccgtcacgcggctga
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