Paroceanicella profunda: FDP22_19395
Help
Entry
FDP22_19395 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_19395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_19395
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FDP22_19395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDL94039
UniProt:
A0A5B8G3S3
LinkDB
All DBs
Position
pD4M1A:complement(296924..298531)
Genome browser
AA seq
535 aa
AA seq
DB search
MDKIDHKKILAARIAAGLGRRAVLKGMGAGLVTTAASGLVPRRASAQSGGHITIAALNHI
DTLDPHFTGFLAAIQVINNIHNGLLKIVYDGKAVTFEPDLAESWELLDDVTHVFKLREGV
TFHDGTPCDAEAVKFSLLRVKEGEPASPHAWKLSLLETIEIPDPLTIKLTFSTPYAFLPV
ALNGSTGRAGTIVSPAAVQKYGADYGRNPVGTGPFKFVSWRENDAIELEKNPDYFEEGLP
KLDGATWKLMKEPSSAVAALMAGQVDGMTDCPMQLVSQVDAFPGATLYGEIEGNYTFVGM
NTRKAPFDDINLRRAVAWALDRETLLKQAYFGRAIQAFTPISPPMTGFYDPEIATSGRGQ
WFDLDKAKEFRAKAANQGEIEAVYMMSERGPVGTRIAQTVAPMLAKIGIKAKLELIEPAT
WVQRRNAGDFDLFDFEWVADLDPDETLFPEFKSGGAWNFPGWSSPEFDDLCTQAQVVLDT
PTRAGLYHKAEDILMDEAPIAMMAHMPVYKVLSTKVQGFQYIPADLFNLHTLSLG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcgatcacaagaagatccttgccgcccgtatagctgccggcctgggccgg
cgcgcggtgctcaagggcatgggagcggggctggtgacaaccgccgcttccgggctggtg
ccgcgccgcgcctccgcacagtcgggcgggcacatcaccatcgccgcgctcaaccacatc
gacacgctggacccgcatttcaccggcttcctggccgccatccaggtgatcaacaacatc
cacaacgggttgctgaagatcgtctatgacggcaaggcggtcaccttcgagcccgatctc
gccgagagctgggagctgctggacgacgtgacccacgtcttcaagctgcgcgagggggtg
accttccacgacggcacgccctgcgacgcggaagcggtgaaattctcgctgctgcgggtg
aaggagggcgagccggcctcgccgcacgcctggaagctctcgctgctcgagaccatcgag
atcccggacccgctcaccatcaagctcaccttctccacgccctacgccttcctgccggtg
gcgctgaacggctccacgggccgcgcgggcaccatcgtgagcccggccgccgtgcagaaa
tacggcgccgactacgggcgcaacccggtgggcaccgggccgttcaagttcgtctcctgg
cgcgagaacgacgccatcgagctggagaagaaccccgactacttcgaggagggcctgccg
aagctcgacggcgccacctggaagctgatgaaggaaccctcctccgccgtggccgcgctg
atggcggggcaggtggacggcatgaccgactgcccgatgcagcttgtctcccaggtcgac
gccttccccggcgccacgctctacggcgagatcgagggcaactacaccttcgtgggcatg
aacacccgcaaggcgcccttcgacgacatcaacctgcgccgcgccgtggcctgggcgctg
gaccgcgagaccctgctcaagcaggcctatttcggccgcgccatccaggccttcaccccg
atctccccgccgatgaccggcttctacgaccccgagatcgccacctccggccgcggccag
tggttcgacctcgacaaggcgaaggaattccgcgccaaggcggcgaaccagggcgagatc
gaggcggtctacatgatgtccgagcgtggcccggtgggcacccgcatcgcccagaccgtg
gcgccgatgctggccaagatcggcatcaaggcgaagctggagctgatcgagcccgcaacc
tgggtgcagcgccgcaacgccggcgacttcgacctgttcgacttcgaatgggtggccgac
ctcgacccggacgagacgctgttcccggagttcaagtccggcggggcctggaacttcccc
ggctggtcctcgcccgagttcgacgatctctgcacccaggcccaggtggttctggacacg
cccacgcgcgccgggctctaccacaaggcggaggacatcctgatggatgaggcgcccatc
gcgatgatggcgcacatgccggtctacaaggtgctctccaccaaggtgcagggcttccag
tacatcccggccgacctgttcaacctgcacacgctaagtctcggctga
DBGET
integrated database retrieval system
