Paroceanicella profunda: FDP22_20220
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Entry
FDP22_20220 CDS
T06319
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_20220
Transporters [BR:
ppru02000
]
Other transporters
Pores ion channels [TC:
1
]
FDP22_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON_like
BON
Motif
Other DBs
NCBI-ProteinID:
QDL94181
UniProt:
A0A5B8FIU0
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All DBs
Position
pD4M1A:complement(482259..484175)
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AA seq
638 aa
AA seq
DB search
MRSRAAIFLTLSVLGLGAASYGAGAALTRRIEAETVAGLDRMLTAAGLHWATVTADGLEV
TLGGDAPDAAARTAAREVAGRLVSAWRLRDATSLRPPAPDPDIAFRVEILRDEARVTLAG
ILPDDGSRARLDAAIGTIGETAGGVDLDDSTQVMHAAPGAEWARSLDLAITALTGLGKAQ
IGLARCAVTISGVAASPEAAARLTQALRAAGGNCLSGLDIIAPRPLVSPYVFSLAAARTG
GGDTDPPAPMHLEACTAQSREEARAIEQRLVALGVTGSSGEAPGPGAPAGAPHCTEGLGA
PSADWGAAVMSGLDAVAALGGGVLSFVDTDVVLDAPPEVDPDLFDAEVTKLRDALPAMFS
LEAQIGTDDGEEEGALSLATLPPAEFRAKRDADGRVALSGPMPNEAGKLALYTFAVSLFG
SEQVEDRMIVEPTLPDGWSGRVMAGLKALALLENGILVVEEADLSLAGRTLDPDGRAEAR
ALLTPVTGADRTLRLTVSYDAEAAARASLPAPDTCLDEMRAALAAQQIIFAPASTQIDPE
SLPVVEALAATLKGCAPAVFEVGAYTDTSGSDELNLRLSRDRAQAVLEALVARGVPLDRL
RAKGYGEADPIADNATEAGRALNRRIGLRILEEPDGRN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagccgcgcggccatcttcctgacgctttccgtgctcggcctgggcgcggcgagc
tatggagccggcgccgcgctcacccgccgcatcgaggcagaaaccgtcgcggggctggac
cgcatgctcaccgcggccgggctgcactgggccacggtgacggcggacgggctggaggtg
acactgggcggcgacgcgccggacgcggcggcgcgcacggcggcgcgcgaggtggcgggg
cggctggtctccgcctggcggctgcgcgatgccaccagcctgcgcccacccgcccccgac
ccggacatcgccttccgcgtcgagatcctgcgcgacgaggcgcgggtcaccctcgccggc
atcctgcccgacgacggcagccgcgcccggctggacgccgccatcggcaccatcggcgag
accgccggcggggtggatctcgacgattccacccaggtgatgcatgccgcgcccggcgcg
gaatgggcgcgctcgctcgaccttgccatcacggcgctcaccggcctgggcaaggcgcag
atcgggctggcgcgctgcgcggtgaccatctccggcgtcgccgcctcgccggaggccgcg
gcgcggctgacgcaggcgctgcgcgccgcgggcggcaattgcctctccgggctcgacatc
atcgcgccgcgcccgctggtgagcccctacgtgttctcgctcgccgccgcgcgtaccggt
gggggcgacacggacccccccgcgccgatgcacctggaagcctgcaccgcccagtcgcgt
gaggaggcccgggccatcgagcagcgcctggtggccctgggcgtgaccggctcctccgga
gaggcgccgggcccgggcgcgcccgccggcgccccgcactgcacggaagggctcggcgcg
ccctcggcggactggggcgcggcggtgatgtccgggctcgacgccgtcgcggcgctcggc
ggcggcgtgctctccttcgtggacacggacgtggtgctggacgcgccgcccgaggtggac
ccggacctgttcgatgccgaggtcacgaagctgcgcgacgccctgccggcgatgttctcg
ctcgaggcgcagatcggcacggacgacggggaggaggagggcgccctctctctcgccacc
ctgccgccggcggagttccgcgccaagcgcgacgcggacggcagggtcgccctcagcggt
ccgatgcccaacgaggccggcaagctggcgctctacaccttcgcggtgtcgctgttcggc
agcgagcaggtggaggaccggatgatcgtggagcccacgttgccggacggctggtccggc
cgggtgatggccgggctgaaggcgctggcgctgctggagaacggcatcctggtggtggag
gaggccgatctcagcctcgccgggcgcacgctggaccccgacggcagggcggaggcgcgg
gcgctgctcaccccggtgaccggggcggaccgcacgctgcggctcaccgtctcctatgac
gcggaagcggcggcgcgcgccagcctgccggcgcccgacacctgcctggacgagatgcgc
gccgcgctggccgcgcaacaaatcatcttcgcgccggcctccacacagatcgacccggag
agcctgccggtggtcgaggcgctggctgccacgctgaagggttgcgccccggcggtgttc
gaggtgggcgcctacaccgataccagcggctcggacgagctgaatctgcggctgagccgt
gaccgggcccaggcggtgctggaggcgctggtcgcgcgcggggtgccgctcgacaggctg
cgggcgaagggctatggcgaggcggacccgatcgccgacaacgcgacagaggccggccgg
gcgctgaaccgccgcatcggcctgcgcatcctggaggagcccgatggacgcaactag
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