Paroceanicella profunda: FDP22_21175
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Entry
FDP22_21175 CDS
T06319
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppru03000
]
FDP22_21175
Transcription factors [BR:
ppru03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FDP22_21175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_Crp_2
HTH_38
HTH_Tnp_ISL3
HTH_26
HTH_50
Crp
Motif
Other DBs
NCBI-ProteinID:
QDL94387
UniProt:
A0A5B8FJG0
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All DBs
Position
pD4M1B:101497..102534
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AA seq
345 aa
AA seq
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MNRKYPSIQDVARLAGVSTATVSRTLSRPELVTEATRSAVHIAIEAAGYKLSPALHSLQR
RTTGGVVALVPNLSNPFFCKVLDGITSVLSPSGYALLVADTTTQGCSTANGLAGYIEQGR
ADGLILLDGSLDPALFSTGSTARMALPLVQVGEWIEGLSAPRVSSDNREGTGIAVRHLAR
LGHRRIGHVTGPAGNVLTDARKRGLKDALAALDLPCRKEWMFDGDFSFAAGVRAARAWTD
LSDRPTGMVFANDEMACSFVSELRRAGFSVPGDVSVIGFDDIDLGTHLSPALTTLRQPRA
ELGAHAARTLLELMAKGSGAGCAALDLVLPVELILRESTSAPPFA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagtacccaagcattcaggatgtcgcgcggctcgccggcgtctccaccgcc
accgtaagccgcacgttgtcccggccggagctggtgacggaagccacccgctccgcggtt
cacatcgccatcgaggctgccggctacaagctgagccccgcgctccactccctgcagcgc
aggaccacgggcggggtggtggcgctggtgcccaacctctccaacccgttcttctgcaag
gtgctggacggcatcacctccgtgctctcgccctccggctacgcgctgctcgtggctgac
acgaccacccaaggctgctccaccgccaacgggctggccggatacatcgagcagggccgc
gcggacgggctcatcctgctcgacggctcgctggacccggcgctgttcagcaccggcagc
accgcgcgcatggccctgccgctggtgcaggtcggcgaatggatcgaggggctctccgcc
ccgcgggtgagctcggacaaccgcgagggcacgggcatcgccgtccgccacctcgcccgg
ctcgggcaccgccggatcggccatgtcaccgggcccgccggcaacgtgctcaccgacgcg
cgcaagcgcgggctgaaggacgcgctggcggccctggacctgccgtgccgcaaggagtgg
atgttcgacggcgacttcagcttcgccgccggcgtgcgcgccgcccgggcctggaccgac
ctctccgaccgccccaccggcatggtcttcgccaacgacgagatggcctgcagcttcgtc
tccgaactgcggcgcgccggcttcagcgtgccgggcgacgtctccgtgatcggcttcgac
gacatcgacctcgggacacatctctcccccgcgctcaccaccctgcgccagccgcgcgcg
gagctgggcgcccatgccgcgcggaccctgctcgagctgatggcgaagggctccggcgcg
ggctgcgcggcgctggacctggtgctgccggtcgagctgatcctgcgcgaaagcaccagc
gcaccgcccttcgcctga
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