Paroceanicella profunda: FDP22_22420
Help
Entry
FDP22_22420 CDS
T06319
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02020
Two-component system
ppru02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FDP22_22420
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FDP22_22420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppru02035
]
FDP22_22420
Bacterial motility proteins [BR:
ppru02035
]
Flagellar system
Chemotaxis proteins
MCPs
FDP22_22420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
HAMP_2
Cache_3-Cache_2
Motif
Other DBs
NCBI-ProteinID:
QDL94629
UniProt:
A0A5B8G571
LinkDB
All DBs
Position
pD4M1C:123620..125701
Genome browser
AA seq
693 aa
AA seq
DB search
MISFLGKSIARRLYVLIGIFAIGFAGIVGYQLLTLRDNLDSFKRSELVSVVGAARSIVED
HYNRSQAGEFPEEEARSRALSVLRGLRYQDGGYVFVDSFDMVLLMHPTKPDKEGSDRSVE
KDGRGKLFMKQLISETRANGSTFVDYYFKDPDGGWFEKLSYAEAFRPWGWTIASGVLLTS
VTAIFINAALVSGLVTLGIIVVMLMLGVIVARSITRPMSRLNADMLAIAGGDFDVTLQGQ
QRKDEIGGMTRAVEVFRENGLKVARLTEAEAARAVADREARASMMAELQRAFGDVVGSAA
SGDFHRRVTATFPDAELNGLASGVNSLVETVERGLTETGNVLSALANTDLTHRVEGKYEG
DFAKLRDDTNKVADRMTDIVVQLRRTSGALRSATGEILLGSHDLSDRSSRQAATIEETSA
AMQELASTVVANAKKAEEASVNAGSVSRAAEEGGRVMAEATTAMQRIRSSSDKISSIIGM
IDDIAFQTNLLALNASVEAARAGEAGKGFAVVAVEVRRLAQSAAEASAEVKALVEQSAAE
VGDGSRLVADAAERLEAMLSSARENRTLLDSIAEASREQASSIREVDSAVRQMDEMTQHN
ASLVEETNAAIQKTEVQARELDVLVDVFRVNDSSVAPVRTKPVAAAKPAKPAAPAAPAKP
AAAAPAAKVPNHAPARRVGNLAVKPQEESWEGF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatcagctttctggggaaaagcattgcccggcggctctacgtcctgatcggcatcttt
gccatagggttcgcggggatcgtcggatatcagctcctgacacttcgggacaacctcgac
agtttcaagcgcagcgagctggtcagcgtggtcggcgccgcgcgcagcatcgtggaggat
cattacaaccgctcccaggccggggaattcccggaggaggaggccaggagcagggcgctc
tccgtgctgcgcggcctgcgttaccaggacggcggctatgtcttcgtggacagtttcgac
atggtgctgctcatgcaccccacgaagccggacaaggaaggcagcgaccgttcggtggag
aaggacggccgcggcaagttgttcatgaagcagctgatttccgagacccgcgccaacggc
tcgaccttcgtggactactatttcaaggatcccgacggcggctggttcgagaagctctcc
tatgccgaggccttccgcccctggggctggaccatcgcctcgggcgtgctgctcaccagt
gtcactgccatcttcatcaatgccgccctggtcagcggcctcgtcaccctgggaatcatc
gtggtgatgctgatgctcggcgtcatcgtcgcccggtcgatcacccggccgatgtcgcgg
ctgaatgccgacatgctggccatcgcgggtggagatttcgacgtcaccctgcaggggcag
cagcgaaaggacgagatcggcggcatgacccgcgccgtggaggtgttccgcgagaacggc
ctgaaggtggcccggctcaccgaggccgaggccgcccgggccgtggcggaccgggaggca
cgggccagcatgatggccgagttgcagcgcgccttcggcgacgtggtcggcagtgccgct
tcgggcgacttccaccgccgggtgaccgcgaccttcccggatgccgagctgaacggcctg
gccagcggcgtgaacagcctggtggaaaccgtggagcgcggtctcacggaaaccggcaac
gtgctctccgccctcgcgaacaccgacctcacccaccgtgtggagggcaagtacgagggc
gatttcgccaagctgcgcgacgacaccaacaaggtggcggaccggatgaccgacatcgtg
gtgcagttgcgccgcacctccggcgcactgcgctcggccaccggggagatcctgctcggc
tcccacgacctctccgatcgcagctcgcgccaggccgcgaccatcgaggaaacctccgcc
gccatgcaggaactggcctccaccgtggtcgccaacgccaagaaggccgaggaggcaagc
gtgaacgcgggcagtgtctcgcgcgcggcggaggagggcggccgggtgatggccgaggcg
accaccgcgatgcagcggatccgcagttcctcggacaagatctccagcatcatcggcatg
atcgacgacatcgccttccagaccaacctgctcgcgctcaacgcctccgtcgaggcggcg
cgggccggcgaggcgggcaagggcttcgcggtcgtggccgttgaggtgcgccgcctcgcc
cagagcgccgccgaggcctcggccgaggtgaaggcgctggtcgagcagagcgctgcggaa
gtcggcgacggctcccgtctcgtcgccgatgcggcggagcggctggaagccatgctctcc
tcggcccgcgagaaccggaccctgctcgacagcatcgccgaggcgagccgcgagcaggcc
tcctccatccgcgaggtcgacagtgccgtgcgccagatggacgagatgacccagcacaat
gcgtcgctcgtcgaggaaaccaatgccgccatccagaaaaccgaagtccaggcccgcgag
ctggatgtactggtggatgtcttccgggtgaatgacagttccgtcgcaccggtcaggacg
aaaccggtggccgccgcgaaacccgcgaagcccgccgcgccggcagcccctgcaaagccc
gcggccgcggccccggccgcgaaggtccccaatcacgccccggcgcgcagggtcgggaac
ctcgcggtgaagccgcaggaggaaagctgggaggggttctga
DBGET
integrated database retrieval system
