Paroceanicella profunda: FDP22_23025
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Entry
FDP22_23025 CDS
T06319
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02020
Two-component system
ppru02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FDP22_23025
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FDP22_23025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppru02035
]
FDP22_23025
Bacterial motility proteins [BR:
ppru02035
]
Flagellar system
Chemotaxis proteins
MCPs
FDP22_23025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
HAMP_2
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QDL94748
UniProt:
A0A5B8FJV0
LinkDB
All DBs
Position
pD4M1D:81249..84194
Genome browser
AA seq
981 aa
AA seq
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MRTQLTIMVTGLCLVIALAVGGMSYFSARDAALARSEAALKARAVREAAAVAEYLSGARY
DLEYLAGSVRAGGGVAALRTGWETADPAAMRRLYLEGNPNPVGSRQKLDDAGDGSAYSAA
HALWHPTLRAFQQNRGYYDLFLIGPAGRVLYTVFKEADFGDDLSRAPLSSSGLGEVYARV
RDAGPGGGVAFSDFRPYAPSAGVPASFMALGIWGDSGALEGVIAAQIPSDRIEALLKAED
DPDTGRYSFLIGADGLLRSDTDLTTQDDILSTRFDTSTLEGDIDVVPGLAGTLSHVAIAP
VQPVPGFGSGGGWRLVSQVPEEVFLGPVRQLGMRILAISALLVLVAAVLGFLLARSFTRP
ILGITQAVKVLAEGKTTDVPGSGRSDEIGDLSRSLFAIHEASAEAKRVGAAVESSSALFL
LADENRQIVYLNGALKQTLESSRPFFEKQIPGWDGSFIGRYLDTFGRGGVLERRNLEVMD
HPISSELSFDDRMFEMILAPVLLDDGTLLGYVTQWTERTRQRQAEQQIAAMIAAIGSGDF
SRRVEIQGQDGFIREAAQGVNRIGELVSGFLGELDTVLSALAEGDMTGRMDMSRGGQYQR
LAEVTNRSISTLSDLVVRISAAQGRMTSTSQAILTGATDLAKRAEEQAASLEETAATMEE
MTANVRASAENATKVTGLARDAAGRASEGQEVVSNAVSAMVKIEESSGKISDITAVIDSI
AFQTNLLALNAAVEAARAGDAGKGFAVVASEVRTLAQRSSQAARDIKDLIQDSSAHVTRG
VDLVKGTGTALTGIVESITRVAGTIEEISNASREQSSGIEEISSVVSSMDERTQANAQVA
EESAGSARQISEVAGELGTLIGVFRTGKTAATATVSGPARRPASAPASTGGEQHQDAEWE
RLAQARRARPTASSTSPSASPAKPPAARAAAKPAKPAAAARPAAKPPAPLPRAPQAPAAR
PRVAAPAAPAASQRDDDWSEF
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccagctcaccatcatggtgacgggcctgtgtcttgtcatcgccctggcggtg
ggcgggatgagttatttcagtgcccgggacgcggcactcgcgcggtcggaggcggctctg
aaggccagggccgtgcgcgaggccgcggcggtggcggagtatctgtccggggcccggtat
gacctggagtatctcgccggctcggtgcgcgcgggagggggggtggcggccctccggacg
ggctgggaaacggcagaccccgccgcgatgcgccggctctacctggagggcaatcccaat
ccggtgggcagccggcagaagctcgacgatgccggcgacggctcggcctattcggccgcc
catgccctctggcacccgaccctgcgcgccttccagcaaaaccgggggtattacgacctg
ttcctgatcgggcccgcgggccgggtgctctacacggtcttcaaggaggccgatttcggc
gatgatctctccagggcgccactgtcctcctccgggctcggggaggtctacgcacgggtg
cgcgacgccgggcccggcggcggcgtggccttctcggacttccgtccctacgcgccgagc
gccggcgtgccggcaagcttcatggcgctcggaatctggggcgattccggcgcgctggag
ggggtgattgcggcgcagattccctccgaccgcatcgaggccctgctcaaggccgaggat
gatccggacacggggcgctactccttcctgatcggcgccgacggcctgctgcgcagcgac
acggacctcacgacgcaggacgacatcctgtccacccgcttcgacaccagcaccctggag
ggggatatcgacgtcgtgccgggccttgccggcacgctgtcgcatgtcgccattgccccg
gttcagccggtgcccggcttcgggtcgggcggcggctggaggctggtttcccaggtgccc
gaggaggtgttcctcggcccggtgcgccaactgggcatgaggatccttgcgatctcggcg
ctgctcgtgctcgtcgcggctgtgctgggcttcctgctcgcgcgcagcttcacccgcccg
atcctgggcatcacccaggcggtaaaggtgcttgcggagggcaagacgaccgatgtgccc
ggctccggccggtccgacgagatcggcgacctgtcgcgctccctcttcgcgatccacgag
gcctccgccgaggccaagcgcgtgggggccgcggtcgagagttcctcggcgctgttcctg
ctcgcggacgaaaaccgccagatcgtctatctcaacggcgcactgaaacagacgctggag
agttcccggccgttcttcgagaagcagatccccggctgggacggcagcttcatcggtcgc
tatctcgacacgttcggccgcggcggcgtgctggagcggcgcaatctcgaggtgatggat
catccgatctccagcgagctgagcttcgatgaccggatgttcgagatgatcctcgccccg
gtcctgctcgatgacggcaccctgctgggctatgtcacgcaatggaccgagcggacccgc
cagcgccaggccgaacagcagatcgcggcgatgatcgcggcgatcggctccggggacttc
tcccgccgggtcgagatccagggccaggacggcttcatccgcgaggcggcccagggcgtc
aaccggatcggcgaactggtgagcggcttcctcggggagctcgacaccgtgctctccgcc
cttgccgaaggggacatgaccgggcgcatggacatgtcgcggggcggccagtaccagcgg
cttgccgaggtcaccaaccgcagcatctccaccctgagcgacctcgtggtgcgcatctcc
gcggcccagggccggatgaccagcaccagtcaggccatcctcaccggggcgaccgatctt
gccaagcgggccgaggaacaggccgcctcgcttgaggaaacggccgcgaccatggaggag
atgaccgccaacgtgcgcgccagcgccgagaatgccaccaaggtgaccgggcttgcccgc
gatgcggccgggcgcgccagcgaaggccaggaagtggtgagcaacgcggtctcggccatg
gtcaagatcgaggagagttccggcaagatctccgacatcaccgcggtgatcgactcgatc
gccttccagaccaaccttctggcgctgaacgcggccgtcgaggcggcgcgggccggcgat
gccggcaagggcttcgccgtggtggcctccgaggtgcgcacgctcgcgcagcgctccagc
caggccgcccgcgacatcaaggatctgatccaggacagctcggcccatgtcacccgcggc
gtggacctggtcaagggcaccggcaccgcgctcacgggcatcgtggaatcgatcacccgc
gtggccgggaccatcgaggaaatctccaatgccagccgcgagcagtcgagcggcatcgag
gaaatctcgagcgtggtcagcagcatggacgagcgcacccaggccaatgcccaggttgcg
gaggagagtgccggttccgcccgccagatcagcgaggtcgccggcgaactgggcacgctg
atcggggtcttccgcaccggcaagaccgcggccacggccacggtgtccgggcctgcgcgg
cgtccggcctcggcccccgcctccaccgggggcgagcagcatcaggatgcggaatgggag
cgcctcgcccaggcccggcgcgccaggccgaccgcctcttccacgtcgccctcggccagc
ccggcaaagccgcccgccgcgcgcgccgccgccaagccggcaaaaccggccgcagcggca
cgccctgccgccaagccgcccgcaccgctgccgcgggccccgcaggcccccgccgcccgg
ccgcgcgttgcggcgccggctgcccccgctgcgtcgcagcgtgatgacgattggtcggag
ttctga
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