KEGG   Paroceanicella profunda: FDP22_23025
Entry
FDP22_23025       CDS       T06319                                 
Name
(GenBank) HAMP domain-containing protein
  KO
K03406  methyl-accepting chemotaxis protein
Organism
ppru  Paroceanicella profunda
Pathway
ppru02020  Two-component system
ppru02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FDP22_23025
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    FDP22_23025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ppru02035]
    FDP22_23025
Bacterial motility proteins [BR:ppru02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    FDP22_23025
SSDB
Motif
Pfam: MCPsignal dCache_1 HAMP HAMP_2 PAS_8
Other DBs
NCBI-ProteinID: QDL94748
UniProt: A0A5B8FJV0
LinkDB
Position
pD4M1D:81249..84194
AA seq 981 aa
MRTQLTIMVTGLCLVIALAVGGMSYFSARDAALARSEAALKARAVREAAAVAEYLSGARY
DLEYLAGSVRAGGGVAALRTGWETADPAAMRRLYLEGNPNPVGSRQKLDDAGDGSAYSAA
HALWHPTLRAFQQNRGYYDLFLIGPAGRVLYTVFKEADFGDDLSRAPLSSSGLGEVYARV
RDAGPGGGVAFSDFRPYAPSAGVPASFMALGIWGDSGALEGVIAAQIPSDRIEALLKAED
DPDTGRYSFLIGADGLLRSDTDLTTQDDILSTRFDTSTLEGDIDVVPGLAGTLSHVAIAP
VQPVPGFGSGGGWRLVSQVPEEVFLGPVRQLGMRILAISALLVLVAAVLGFLLARSFTRP
ILGITQAVKVLAEGKTTDVPGSGRSDEIGDLSRSLFAIHEASAEAKRVGAAVESSSALFL
LADENRQIVYLNGALKQTLESSRPFFEKQIPGWDGSFIGRYLDTFGRGGVLERRNLEVMD
HPISSELSFDDRMFEMILAPVLLDDGTLLGYVTQWTERTRQRQAEQQIAAMIAAIGSGDF
SRRVEIQGQDGFIREAAQGVNRIGELVSGFLGELDTVLSALAEGDMTGRMDMSRGGQYQR
LAEVTNRSISTLSDLVVRISAAQGRMTSTSQAILTGATDLAKRAEEQAASLEETAATMEE
MTANVRASAENATKVTGLARDAAGRASEGQEVVSNAVSAMVKIEESSGKISDITAVIDSI
AFQTNLLALNAAVEAARAGDAGKGFAVVASEVRTLAQRSSQAARDIKDLIQDSSAHVTRG
VDLVKGTGTALTGIVESITRVAGTIEEISNASREQSSGIEEISSVVSSMDERTQANAQVA
EESAGSARQISEVAGELGTLIGVFRTGKTAATATVSGPARRPASAPASTGGEQHQDAEWE
RLAQARRARPTASSTSPSASPAKPPAARAAAKPAKPAAAARPAAKPPAPLPRAPQAPAAR
PRVAAPAAPAASQRDDDWSEF
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgagaacccagctcaccatcatggtgacgggcctgtgtcttgtcatcgccctggcggtg
ggcgggatgagttatttcagtgcccgggacgcggcactcgcgcggtcggaggcggctctg
aaggccagggccgtgcgcgaggccgcggcggtggcggagtatctgtccggggcccggtat
gacctggagtatctcgccggctcggtgcgcgcgggagggggggtggcggccctccggacg
ggctgggaaacggcagaccccgccgcgatgcgccggctctacctggagggcaatcccaat
ccggtgggcagccggcagaagctcgacgatgccggcgacggctcggcctattcggccgcc
catgccctctggcacccgaccctgcgcgccttccagcaaaaccgggggtattacgacctg
ttcctgatcgggcccgcgggccgggtgctctacacggtcttcaaggaggccgatttcggc
gatgatctctccagggcgccactgtcctcctccgggctcggggaggtctacgcacgggtg
cgcgacgccgggcccggcggcggcgtggccttctcggacttccgtccctacgcgccgagc
gccggcgtgccggcaagcttcatggcgctcggaatctggggcgattccggcgcgctggag
ggggtgattgcggcgcagattccctccgaccgcatcgaggccctgctcaaggccgaggat
gatccggacacggggcgctactccttcctgatcggcgccgacggcctgctgcgcagcgac
acggacctcacgacgcaggacgacatcctgtccacccgcttcgacaccagcaccctggag
ggggatatcgacgtcgtgccgggccttgccggcacgctgtcgcatgtcgccattgccccg
gttcagccggtgcccggcttcgggtcgggcggcggctggaggctggtttcccaggtgccc
gaggaggtgttcctcggcccggtgcgccaactgggcatgaggatccttgcgatctcggcg
ctgctcgtgctcgtcgcggctgtgctgggcttcctgctcgcgcgcagcttcacccgcccg
atcctgggcatcacccaggcggtaaaggtgcttgcggagggcaagacgaccgatgtgccc
ggctccggccggtccgacgagatcggcgacctgtcgcgctccctcttcgcgatccacgag
gcctccgccgaggccaagcgcgtgggggccgcggtcgagagttcctcggcgctgttcctg
ctcgcggacgaaaaccgccagatcgtctatctcaacggcgcactgaaacagacgctggag
agttcccggccgttcttcgagaagcagatccccggctgggacggcagcttcatcggtcgc
tatctcgacacgttcggccgcggcggcgtgctggagcggcgcaatctcgaggtgatggat
catccgatctccagcgagctgagcttcgatgaccggatgttcgagatgatcctcgccccg
gtcctgctcgatgacggcaccctgctgggctatgtcacgcaatggaccgagcggacccgc
cagcgccaggccgaacagcagatcgcggcgatgatcgcggcgatcggctccggggacttc
tcccgccgggtcgagatccagggccaggacggcttcatccgcgaggcggcccagggcgtc
aaccggatcggcgaactggtgagcggcttcctcggggagctcgacaccgtgctctccgcc
cttgccgaaggggacatgaccgggcgcatggacatgtcgcggggcggccagtaccagcgg
cttgccgaggtcaccaaccgcagcatctccaccctgagcgacctcgtggtgcgcatctcc
gcggcccagggccggatgaccagcaccagtcaggccatcctcaccggggcgaccgatctt
gccaagcgggccgaggaacaggccgcctcgcttgaggaaacggccgcgaccatggaggag
atgaccgccaacgtgcgcgccagcgccgagaatgccaccaaggtgaccgggcttgcccgc
gatgcggccgggcgcgccagcgaaggccaggaagtggtgagcaacgcggtctcggccatg
gtcaagatcgaggagagttccggcaagatctccgacatcaccgcggtgatcgactcgatc
gccttccagaccaaccttctggcgctgaacgcggccgtcgaggcggcgcgggccggcgat
gccggcaagggcttcgccgtggtggcctccgaggtgcgcacgctcgcgcagcgctccagc
caggccgcccgcgacatcaaggatctgatccaggacagctcggcccatgtcacccgcggc
gtggacctggtcaagggcaccggcaccgcgctcacgggcatcgtggaatcgatcacccgc
gtggccgggaccatcgaggaaatctccaatgccagccgcgagcagtcgagcggcatcgag
gaaatctcgagcgtggtcagcagcatggacgagcgcacccaggccaatgcccaggttgcg
gaggagagtgccggttccgcccgccagatcagcgaggtcgccggcgaactgggcacgctg
atcggggtcttccgcaccggcaagaccgcggccacggccacggtgtccgggcctgcgcgg
cgtccggcctcggcccccgcctccaccgggggcgagcagcatcaggatgcggaatgggag
cgcctcgcccaggcccggcgcgccaggccgaccgcctcttccacgtcgccctcggccagc
ccggcaaagccgcccgccgcgcgcgccgccgccaagccggcaaaaccggccgcagcggca
cgccctgccgccaagccgcccgcaccgctgccgcgggccccgcaggcccccgccgcccgg
ccgcgcgttgcggcgccggctgcccccgctgcgtcgcagcgtgatgacgattggtcggag
ttctga

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