Paroceanicella profunda: FDP22_24265
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Entry
FDP22_24265 CDS
T06319
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
FDP22_24265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QDL94976
UniProt:
A0A5B8G1I3
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Position
pD4M1F:91054..93393
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AA seq
779 aa
AA seq
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MNAVADRITRTIAADIGAKATQVAATVALLDGGATVPFVARYRKEATGGLDDTQLRTLAD
RLAYLRDMEARRATILQSITEQGKLTDALARAIAGAETKSGLEDIYLPFKPKRRTKAMIA
RENGLEPLLRGILAQRDADPRDSAAAFLCEAVPTVKDALEGARQILIEELSENATLLGRL
REFMRREAEISARVVPGKEAEGAKFSDYFDHRETWSGIPSHRALAILRAAKEEVVTVAIA
PDPDTGIPRAEGIIAAEIGIAGSGPGDTWLREAAAWTWRVKLSLSMYIDLMTELRRRAHE
EAIEVFARNLKDLLLAAPAGARPTLGLDPGIRTGVKAAVVDATGKLLETATLYPFQPKND
LRGASETLLGLIRRHGIELIAIGNGTASRETERLAAEVIARLPEGMARPTKVVVSEAGAS
VYSASELAAKEFPDVDVSLRGAVSIARRLQDPLAELVKIEPQSIGVGQYQHDVDQRRLAK
ALEAVVEDAVNAVGVDLNMASAPLLARVAGLGPSLAQAIVSHRDTHGAFATRKALLKVTG
LGPKAFEQSAGFLRIRDGKEPLDASSVHPEAYGVARRIVEACGRDIRAIMGDSAALKGLR
PEQFADETFGLPTVRDILAELEKPGRDPRPGFRTASFAEGVETMADLRPGMLLEGTVTNV
AAFGAFVDIGVHQDGLVHISQLADRFVKDPHEVVKAGDVVKVRVMEVDAPRKRIGLSMRK
DAGAAPRPGRGGDTPSANRAPKPSRPPSGSPKSPSGGKPSGSDMGALGAALSKAMTRKD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcgcagatcgcatcacccgcaccatcgccgccgacatcggcgcgaaggcc
acccaggtggccgccaccgtggccctgctcgacggcggcgcgaccgtccccttcgtggcg
cgttaccgcaaggaagccaccggcgggctggacgacacccagctgcgcaccctcgccgac
cggctggcctatctgcgcgacatggaggcccggcgggccaccatcctccagtcgatcacc
gaacagggcaagctgaccgacgcactggcccgcgccattgccggagcggagaccaagtcc
gggctggaggacatctacctgcccttcaaaccgaagcgccgcaccaaggcgatgatcgcg
cgcgagaacgggctggagccgctgctgcgcggcatcctcgcgcagcgcgacgcggacccc
cgggacagcgcggcggcgttcctctgcgaggcggttcccacggtgaaggacgcgctggaa
ggcgcgcgccagatcctgatcgaggagctgagcgagaacgccacgctgctcggccgcctg
cgcgagttcatgcgccgcgaggccgagatctccgcccgcgtggtgccgggcaaggaggcg
gagggggccaagttctccgactatttcgaccaccgggagacatggtccggcatcccctcg
caccgggcgctggccatcctgcgcgcggcgaaggaggaggtggtgaccgtcgccatcgcc
ccggacccggacaccggcatcccgcgcgccgagggcatcatcgccgcggaaatcggcatc
gccggctcggggcccggcgacacctggctgcgcgaggccgcggcctggacctggcgcgtg
aagctcagcctgtcgatgtacatcgacctgatgaccgagctgcgccgccgcgcgcatgag
gaggccatcgaggttttcgcccgcaatctcaaggacctgctgctggccgcgccggccggc
gcccggcccacgctggggcttgaccccggcatccgcaccggggtgaaggccgcggtggtc
gatgccaccggcaagctgctcgagacggccaccctctacccgttccagccgaagaatgac
ctgcgcggcgcctcggagaccctgctgggcctgatccggcggcacggcatcgagctcatc
gccatcggcaacggcaccgccagccgcgagaccgagcggctggccgcggaggtgatcgcc
cgcctgcccgagggcatggcgcggcccacgaaggtggtggtctcggaggccggcgcctcc
gtctactccgcctcggagctggcggcgaaggaattcccggatgtcgacgtctcgctgcgc
ggcgcggtctccatcgcgcggcgcctgcaggacccgctggccgaactggtgaagatcgag
ccgcagtccatcggcgtgggccagtaccagcacgacgtggaccagcgccggctggccaag
gcgctggaagcggtggtcgaggacgcggtgaacgccgtgggcgtcgacctcaacatggcc
tcggcgccgctgctggcgcgggtggcgggcctcggcccctccctcgcgcaggccatcgtg
agccaccgtgacacgcatggcgccttcgccacccgaaaggcgcttctgaaggtgaccggc
ctcggcccgaaggcctttgagcagagcgcggggttcctgcgcatccgcgacgggaaggag
ccgctggacgcctcctccgtccacccggaagcctatggcgtggcccggcgcatcgtggag
gcctgcggccgcgacatccgcgccatcatgggcgacagcgccgcgctgaaggggctgcgc
cccgagcagttcgccgacgagaccttcggcctgcccaccgtgcgcgacatcctcgccgag
ctggagaaacccgggcgagacccgcgccccggcttccgcaccgccagcttcgccgagggc
gtggagaccatggccgacctgcgcccgggcatgctgctggagggcacggtgaccaacgtg
gccgccttcggcgccttcgtggacatcggcgtgcaccaggacgggctcgtccacatcagc
cagctcgcggaccgtttcgtgaaggacccgcatgaggtggtgaaggccggcgacgtggtg
aaggtgcgcgtcatggaggtcgacgccccgcgcaagcgcatcggcctgagcatgcgcaag
gacgccggcgccgcgccccggcccggccgcggcggcgacaccccctccgcaaaccgcgcg
ccgaaaccgtcccgcccgccctccggcagcccgaaatccccctccggcggcaagccgtca
ggctcggacatgggcgccctcggcgcggccctctcgaaggcgatgacccgcaaggactga
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