KEGG   Pan paniscus (bonobo): 100990514
Entry
100990514         CDS       T02283                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F isoform X2
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03250  Viral life cycle - HIV-1
pps05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100990514
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100990514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100990514
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100990514
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 AID dCMP_cyt_deam_1 Toxin-deaminase DUF7136
Other DBs
NCBI-GeneID: 100990514
NCBI-ProteinID: XP_034804996
LinkDB
Position
23:48887665..48906873
AA seq 373 aa
MKPHFRNTVERMYRGTFFYNFNNRPILSRRNTVWLCYEVKTKGPSRPRLDTKIFRGQVYF
QFENHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISAA
RLYYYWERDYRRALCRLRQAGARVKIMDDEEFAYCWENFVYSEGQPFMPWYKFDDNYAFL
HRTLKEILRNPMEAMYPHIFYFHFKNLRKAYGRNESWLCFTMEVMKHHSPVSWKRGVFRN
QVDPETHCHAERCFLSWFCDDILSPNTNYQVTWYTSWSPCPDCAGEVAEFLAGHSNVNLT
IFTARLYYFWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDEPFKPWKGLKYN
FLFLDSKLQEILQ
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaagcctcacttcagaaacacagtggagcgaatgtatcgaggcacattcttctacaac
tttaataatagacccatcctttctcgtcggaataccgtctggctgtgctacgaagtgaaa
acaaagggtccctcaaggccccgtttggacacaaagatctttcgaggccaggtgtatttc
cagtttgagaaccacgcagaaatgtgcttcctctcttggttctgtggcaaccagctgcct
gcttacaagtgcttccagatcacctggtttgtatcctggacaccctgcccggactgtgtg
gcgaagctggccgaattcctggctgagcaccccaatgtcaccctgaccatctccgctgcc
cgcctctactactactgggaaagagattaccgaagggcgctctgcaggctgcgtcaggca
ggggcccgcgtgaagattatggacgatgaagaatttgcatactgctgggaaaactttgtg
tacagtgaaggtcagccattcatgccttggtacaaattcgatgacaattatgcattcctg
caccgcacgctaaaggagattctcagaaacccgatggaggcaatgtatccacacatattc
tacttccactttaaaaacctacgcaaagcctatggtcggaacgaaagctggctgtgcttc
accatggaagttatgaagcaccactcacctgtctcctggaagaggggcgtcttccgaaac
caggtggatcctgagacccattgtcatgcagaaaggtgcttcctctcttggttctgtgac
gacatactgtctcctaacacaaactaccaggtcacctggtacacatcttggagcccttgc
ccagactgtgcaggggaggtggccgagttcctggccgggcacagcaacgtgaatctcacc
atcttcaccgcccgcctctactatttctgggatacagattaccaggaggggctccgcagc
ctgagtcaggaaggggcctccgtggagatcatgggctacaaagattttaaatattgttgg
gaaaactttgtgtacaatgatgatgagccattcaagccttggaaaggactaaaatacaac
tttctattcctggacagcaagctgcaggagattctccagtga

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