Pan paniscus (bonobo): 100990648
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Entry
100990648 CDS
T02283
Symbol
AGRN
Name
(RefSeq) agrin isoform X10
KO
K06254
agrin
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04512
ECM-receptor interaction
pps04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100990648 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100990648 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pps00535
]
100990648 (AGRN)
Proteoglycans [BR:
pps00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100990648 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
EGF_laminin
Kazal_CFAI
SEA
EGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100990648
NCBI-ProteinID:
XP_034807656
LinkDB
All DBs
Position
1:complement(227197744..227232423)
Genome browser
AA seq
1980 aa
AA seq
DB search
MPPLPLARDTRQPPGASLLVRGFMVPCNACLILLATATLGFAVLLFLNNYKPGTHFTPVP
PTPPDACRGMLCGFGAVCEPNAEGPGRASCVCKKSPCPSVVAPVCGSDASTYSNECELQR
AQCSQQRRIRLLSRGPCGSRDPCSNVTCSFGSTCARSADGLTASCLCPATCRGAPEGTVC
GSDGADYPGECQLLRRACARQENVFKKFDGPCDPCQGALPDLSRSCRVNPRTRRPEMLLR
PESCPARQAPVCGDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPCRFNAVC
LSRRGRPRCSCDRVTCDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAP
SPCLGVQCAFGATCAVKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEATACTLGRE
IQVARKGPCDRCGQCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYPSECMLHVHAC
THQMGLHVASAGPCETCGDAVCAFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYGSACEL
REAACLQQTQIEEARAGPCEQAECGSGGSGSGEDGDCEQELCRQRGGIWDEDSEDGPCVC
DFSCQSVPGSPVCGSDGVTYSTECELKKARCESQRGLYVAAQGACRGPTFAPLPPVAPLH
CAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDR
CEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRA
LGPAGCEADASAPATCAEMRCEFGARCVEESGSAHCVCPMLTCPEANATKVCGSDGVTYG
NECQLKTIACRQGLQISIQSLGPCQEAVAPSTHPTSASVTVTTPGLLLSQALPAPPGALP
LAPGSTARSQTTPPPSSRPRTTASVPRTTVWPVLTVPPTAPSPAPSLVASAFGESGSTDG
SSDEELSGDQEASGGGSGGLEPFEGSSVATPGPPVERASCYNSALGCCSDGKTPSLDAEG
SNCPATKVFQGVLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFQNSDVKKD
FRSVRLRDLGPGKSVRAIVDVHFDPTTAFRAPDVARALLRQIQVSRRRSLGVRRPLQEHV
RFMDFDWFPAFITGATSGAIAAVATARAATASRLPSPAVTLRALHPSHTSQPVAKTTAAP
TTRRPPTTAPSRVPGRRPPAPQQPPKPCDSQPCFHGGTCQDWALGGGFTCSCPAGRGGAV
CEKVLGAPVPAFEGRSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALAL
LDGRVQLRFDTGSGPAVLTSAVPIEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTD
GLNLDTDLFVGGVPEDQAAVALERTFVGAGLRGCIRLLDVNNQRLELGIGPGAATRGSGV
GECGDHPCLPNPCHGGAPCQNLEAGRFHCQCPSGRVGPTCADEKSPCQPNPCHGAAPCRV
LPEGGAQCECPLGREGTFCQTASGQDGSGPFLADFNGFSHLELRGLHTFARDLGEKMALE
VVFLARGPSGLLLYNGQKTDGKGDFVSLALQDRHLEFRYDLGKGAAVIRSREPVTLGAWT
RVSLERNGRKGALRVGDGPRVLGESPKSRKVPSASHPLTVSGASTPRVPHTVLNLKEPLY
VGGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAGHPCTRASGH
PCLNGASCVPREAAYVCLCPGGFSGPHCEKGLVEKSAGDVDALAFDGRTFVEYLNAVTES
ELANEIPVPETLDSGALHSEKALQSNHFELSLRTEATQGLVLWSGKATERADYVALAIVD
GHLQLSYNLGSQPVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPLGATQL
DTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRPCPTP
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgctgccgctggcgcgggacacccggcagccgcctggcgcctccctgctggtg
cgaggcttcatggtgccctgcaacgcctgcctgatcctgctggccaccgccacgctcggc
ttcgcggtgctgctgttcctcaacaactataaacccgggacccacttcactccagtgcct
ccgacgcctcctgatgcgtgccggggaatgctgtgcggcttcggcgccgtgtgcgagccc
aacgcggaggggccgggccgggcgtcctgcgtctgcaagaagagcccatgccccagcgtg
gtggcgccggtgtgtgggtcggacgcctccacctacagcaacgaatgcgagctgcagcgg
gcgcagtgcagccagcagcgccgcatccgcctgctcagccgcgggccgtgcggctcgcgg
gacccctgctccaacgtgacctgcagcttcggcagcacctgtgcgcgctcggccgacggg
ctgacggcctcgtgcctgtgccccgcgacctgccgtggcgcccccgaggggaccgtctgc
ggcagcgacggcgccgactaccccggcgagtgccagctcctgcgccgcgcctgcgcccgc
caggagaatgtcttcaagaagttcgacggcccttgtgacccctgtcagggcgccctccct
gacctgagccgcagctgccgtgtgaacccgcgcacgcggcgccctgagatgctcctacgg
cccgagagctgccctgcccggcaggcgccagtgtgtggggacgacggagtcacctacgaa
aatgactgtgtcatgggccgatcgggggccgcccggggtctcctcctgcagaaagtgcgc
tccggccagtgccagggtcgagaccagtgcccggagccctgccggttcaatgccgtgtgc
ctgtcccgccgtggccgtccccgctgctcctgcgaccgcgtcacctgtgacggggcctac
aggcccgtgtgtgcccaggacgggcgcacgtatgacagtgattgctggcggcagcaggcc
gagtgccggcagcagcgtgccatccccagcaagcaccagggcccgtgtgaccaggccccg
tccccgtgcctcggggtgcagtgtgcatttggggcgacgtgtgctgtgaagaacgggcag
gcagcgtgtgaatgcctgcaggcgtgctcgagcctctacgatcctgtgtgcggcagcgac
ggcgtcacatacggcagcgcgtgcgagctggaggccacggcctgtaccctcgggcgggag
atccaggtggcgcgcaaaggaccctgtgaccgctgcgggcagtgccgctttggagccctg
tgcgaggccgagaccgggcgctgcgtgtgcccctctgaatgcgtggctttggcccagccc
gtgtgtggctccgacgggcatacgtaccccagcgagtgcatgctgcacgtgcacgcctgc
acacaccagatgggcctgcacgtggcctcagctggaccctgcgagacctgtggagatgcc
gtgtgtgcttttggggctgtgtgctcggcagggcagtgtgtgtgtccccggtgtgagcac
cccccgcccggccccgtgtgtggcagtgacggtgtcacctacggcagtgcctgcgagcta
cgggaagccgcctgcctccagcagacacagatcgaggaggcccgggcagggccgtgcgag
caggccgagtgcggttccggaggctctggctctggggaggacggtgactgtgagcaggag
ctgtgccggcagcgcggtggcatctgggacgaggactcggaggacgggccgtgtgtctgt
gacttcagctgccagagtgtcccaggcagcccggtgtgcggctcagatggggtcacctac
agcaccgagtgtgagctgaagaaggccaggtgtgagtcacagcgagggctctacgtagcg
gcccagggagcctgccgaggccccaccttcgccccgctgccacctgtggcccccttacac
tgtgcccagacgccctacggctgctgccaggacaatatcaccgcagcccggggcgtgggc
ctggctggctgccccagtgcctgccagtgcaacccccatggctcttacggcggcacctgt
gacccagccacaggccagtgctcctgccgcccaggtgtggggggcctcaggtgtgaccgc
tgtgagcctggcttctggaactttcgaggcatcgtcaccgatggccggagtggctgtaca
ccctgcagctgtgatccccaaggcgccgtgcgggatgactgtgagcagatgacggggctg
tgctcgtgtaagcccggggtggctggacccaagtgtgggcagtgtccagacggccgtgcc
ctgggccccgcgggctgtgaagccgacgcttctgcgcctgcgacctgtgcggagatgcgc
tgtgagttcggtgcgcggtgcgtggaggagtctggctcagcccactgtgtctgcccgatg
ctcacctgtccagaggccaacgctaccaaggtctgtgggtcagatggagtcacgtacggc
aacgagtgtcagctgaagaccatcgcctgccgccagggcctgcaaatctctatccagagc
ctgggcccgtgccaggaggctgttgctcccagcactcacccgacatctgcctccgtgact
gtgaccaccccagggctcctcctgagccaggcactgccggccccccccggcgccctcccc
ctggctcccggcagtaccgcacgcagccagaccacccctccgccctcatcacgacctcgg
accactgccagcgtccccaggaccaccgtgtggcccgtgctgaccgtgccccccacggca
ccctcccctgcacccagcctggtggcgtccgcctttggtgaatctggcagcactgatgga
agcagcgatgaggaactgagcggggaccaggaggccagtgggggtggctctggggggctc
gagcccttcgagggcagcagcgtggccacccctgggccacccgtcgagagggcttcctgc
tacaactcagcgttgggctgctgctctgatgggaagacgccctcgctggacgcagagggc
tccaactgccccgccaccaaggtgttccagggcgtcctggagctggagggcgtcgagggc
caggagctgttctacacgcccgagatggctgaccccaagtcagagctgttcggggagaca
gccaggagcattgagagcaccctggacgacctcttccagaattcagacgtcaagaaggat
tttcggagcgtccgcttgcgggacctggggcccggcaaatccgtccgcgccattgtggat
gtgcacttcgaccccaccacagccttcagggcacccgacgtggcccgggccctgctccgg
cagatccaggtgtccaggcgccggtccttgggcgtgaggcggccgctgcaggagcacgtg
cgatttatggactttgactggtttcctgcgtttatcacaggggccacgtcaggagccatt
gccgcggtagccacggccagagccgccactgcatcgcgcctgccgtcccctgctgtgacc
cttcgggccctgcaccccagtcacacaagccagcccgttgccaagaccacggcagccccc
accacacgtcggccccccaccactgcccccagccgtgtgcccggacgtcggcccccggcc
ccccagcagcctccaaagccctgtgactcacagccctgcttccacggggggacctgccag
gactgggctttgggcgggggcttcacctgcagctgcccagcaggcaggggaggcgccgtc
tgtgagaaggtgcttggcgcccctgtgccggccttcgagggccgctccttcctggccttc
cccaccctccgcgcctaccacacgctgcgcctggcactggaattccgcgcactggagcct
caggggctgctgctgtacaatggcaacgcccgaggcaaggacttcctggcattggcgctg
ctagatggccgcgtgcagctcaggtttgacacaggttcggggccggcggtgctgaccagt
gccgtgccgatagagccgggccagtggcaccgcctggagctgtcccggcactggcgccgg
ggcaccctctcggtggatggtgagacccctgttctgggcgagagtcccagtggcaccgac
ggcctcaacctggacacagacctctttgtgggcggcgtacccgaggaccaggctgccgtg
gcgctggagcggaccttcgtgggcgccggcctgagggggtgcatccgtttgctggacgtc
aacaaccagcgcctggagcttggcattgggccgggggctgccacccgaggctccggcgtg
ggcgagtgcggggaccacccctgcctgcccaacccctgccatggcggggccccatgccag
aacctggaggctggaaggttccattgccagtgcccgtccggccgcgtcggaccaacctgt
gccgatgagaagagcccctgccagcccaacccctgccatggggcggcgccctgccgtgtg
ctgcccgagggtggtgctcagtgcgagtgccccctggggcgtgagggcactttctgccag
acagcctcggggcaggacggctctgggcccttcctggctgacttcaacggcttctcccac
ttggagctgagaggcctgcacacctttgcacgggacctgggggagaagatggcgctggag
gtcgtgttcctggcgcgaggccccagcggcctcctgctctacaacgggcagaagacggac
ggcaagggggacttcgtgtcgctggcactgcaggaccgtcacctggagttccgctacgac
ctgggcaagggggcagcggtcatcaggagcagggagccagtcaccctgggagcctggacc
agggtctcactggagcgaaacggccgcaagggtgccctgcgtgtgggcgacggcccccgt
gtgttgggggagtccccgaaatcccgcaaggtaccgtcggcctctcatccgctcaccgtc
tctggcgcctcaacccctagggttccccacaccgtcctcaacctgaaggagccgctctac
gtagggggggctcccgacttcagcaagctggcccgtgctgctgccgtgtcctctggcttc
gacggcgccatccagctggtctccctcggaggccgccagctgctgaccccggagcacgtg
ctgcggcaggtggacgtcacgtcctttgcaggtcacccctgcacccgggcctcaggccac
ccctgcctcaatggggcctcctgcgtcccgagggaggctgcctatgtgtgcctgtgtccc
gggggattctcaggaccgcactgcgagaaggggctggtggagaagtcggcgggggacgtg
gatgccctggcctttgacgggcggacctttgtcgagtacctcaacgctgtgaccgagagc
gaactggccaatgagatccccgtccccgaaactctggattccggggcccttcacagcgag
aaggcactgcagagcaaccactttgaactgagcctgcgcactgaggccacgcaggggctg
gtgctctggagtggcaaggccacggagcgggcagactacgtggcactggccattgtggac
gggcacctgcagctgagctacaacctgggctcccagcccgtggtgctgcgttccaccgtg
cccgtcaacaccaaccgctggttgcgggtcgtggcacatagggagcagagggaaggttcc
ctgcaggtgggcaatgaggcccctgtgaccggctcctccccgctgggcgccacgcagctg
gacactgatggagccctgtggcttgggggcctgccggagctgcccgtgggcccagcactg
cccaaggcctacggcacaggctttgtgggctgcttgcgggacgtggtggtgggccggcac
ccgctgcacctgctggaggacgccgtcaccaagccagagctgcggccctgccccacccca
tga
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