Pan paniscus (bonobo): 117977491
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Entry
117977491 CDS
T02283
Symbol
APOBEC3D
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3D isoform X1
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03250
Viral life cycle - HIV-1
pps05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117977491 (APOBEC3D)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
117977491 (APOBEC3D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
117977491 (APOBEC3D)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117977491 (APOBEC3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC_C
APOBEC3
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
Toxin-deaminase
DUF7136
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
117977491
NCBI-ProteinID:
XP_034804994
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All DBs
Position
23:48872144..48884260
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AA seq
386 aa
AA seq
DB search
MNPQIRNPMERMYRRTFYNHFENEPILYGRSYTWLCYEVKIKRGCSNLIWDTGVFRGPVL
PKLQSNHRQEVYFQFENHAEMCFFSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFL
AEHPNVTLTISAARLYYYQDREWRRVLRRLHKAGARVKIMDYKDFAHCWENFVYNEGQQF
MPWYKFDDNYASLHRTLKEILRNPMEAMYPHVFYFHFKNLLKACGRNESWLCFTVDVTEH
HPPVSWKRGVFRNPVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAREV
AEFLARHSNVKLTIFTARLYHFWDTDYQEGLCSLSQEGASVKIMSYKDFVSCWKNFVYSD
DEPFKPWKGLKTNFRLLKTMLREILQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacagatcagaaatccgatggagcggatgtatcgacgcacattctacaaccac
tttgaaaacgaacccatcctctatggtcggagctacacctggctgtgctatgaagtgaaa
ataaagaggggctgctcaaatctcatttgggacacaggggtctttcgaggcccggtacta
cccaaacttcagtcgaatcacaggcaggaggtgtatttccagtttgagaaccacgcagaa
atgtgcttcttctcttggttctgtggcaaccgactgcctgctaacaggcgcttccagatc
acctggtttgtatcatggaacccctgcctgccctgtgtggtgaaggtgaccaaattcttg
gctgagcaccccaatgtcaccctgaccatctccgctgcccgcctctactactaccaggat
agagaatggcggagggtgctccgcaggctgcataaggcgggggcccgtgtgaagatcatg
gactataaagactttgcacactgctgggaaaactttgtgtacaatgaaggtcagcaattc
atgccttggtacaaattcgatgacaattatgcatccctgcaccgcacgctaaaggagatt
ctcagaaacccgatggaggcaatgtacccacacgtattctacttccactttaaaaaccta
ctgaaagcctgtggtcggaacgaaagctggctgtgcttcaccgtggacgttacagagcac
cacccacctgtctcctggaagaggggcgtcttccgaaatccggtggatcctgagacccat
tgtcatgcagaaaggtgcttcctctcttggttctgtgacgacatactgtctcctaacaca
aactacgaggtcacctggtacacatcttggagcccttgcccagagtgtgcaagggaggtg
gccgagttcctggccaggcacagcaacgtgaagctcaccatcttcaccgcccgcctctac
cacttctgggatacagattaccaggaggggctctgcagcctgagtcaggaaggggcctcc
gtgaagatcatgagctacaaagattttgtatcttgttggaaaaactttgtgtacagtgat
gatgagccattcaagccttggaagggactaaaaaccaactttcgacttctgaaaacaatg
ctacgggagattctccagtga
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