Podospora pseudoanserina: QC764_211100
Help
Entry
QC764_211100 CDS
T09816
Symbol
RAD16
Name
(RefSeq) DNA repair protein rad16
KO
K15083
DNA repair protein RAD16
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsa03400
]
QC764_211100 (RAD16)
DNA repair and recombination proteins [BR:
ppsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
QC764_211100 (RAD16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
DEAD
zf-C3HC4_2
AAA_34
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
87965680
NCBI-ProteinID:
XP_062803684
LinkDB
All DBs
Position
2:complement(4099724..4106494)
Genome browser
AA seq
967 aa
AA seq
DB search
MVQTRRSLAAGEIVAASPLPDSVPSVKQRGKPPAKKLALSTESSASPTPQAYSSASEYST
PLTSNVATPVPTEAPLTVPGKMIEVVLTTRRARARPSKVPEDDPYSVAPKRKRNVIEDSE
EELSDYSPDAELARRLQKEEDAAAANFAIPSLQTKAKPRSRRAGLTKGKTEAMLTSPHAR
APVRRYGKKNEEVPLPQTSKTRVGVKRPAIVSDSEDDDDDEDDDDFEEVDSDDSLPLIKT
RAARPPTGPIRNHDLNVAEGESEISEDDFDGTADDVSDDDGSNIASEVGSTAGAPTNRGN
SAIRTAMANRRAYRSYANSRRVRNDRRRLEKNHPELTTMWEDLKNMPILKAGKAAQPTSI
SRQLKPFQLEGLAWMQAMEKTEWKGGLLGDEMGLGKTIQAVSLIMSDFPQPKPTLVLVPP
VALMQWMTEIESYTDGTLKTLVYHGTNAKSKNIKVKDIKKYHVIIMSYNSLESVFRKQEK
GFKRQGGLVKEKSVIHQTEFHRIILDEAHSIKTRTTMTAKACFALKVTYRWCLSGTPLQN
RIGEFFSLIRFLNVRPFACYLCKHCPCKTMEWSMDEDSRCTECKHGGMQHVSVFNQELLN
PIQKYGNRGEGAEAFKKLRVLTDRIMLRRLKKDHTDSMELPVKEINVERQFFGEAENDFA
NSIMTNGQRKFDTYVATGVLLNNYANIFGLIMQMRQVADHPDLLLKKHSEGGQNVIVCAI
CDETAEDAIRSRCKHDFCRTCVKSYLNSAEEPNCPQCHIPLSIDLEQPEIEQDETMVKKS
SIINRIKMENWTSSSKIELLVHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITT
VMLDGSMTPAQRQASIHHFMTNPDVECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEW
QSADRCHRIGQTRPCTITRLCIEDSVESRMVLLQEKKTNMINSTINSDDAAMDSLSPEDL
QFLFRGS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggtacagacgaggaggtcgctcgcagccggcgagattgttgcggcgtcccctctgccc
gactcagtcccctcggtcaagcaaagaggcaaacccccagccaaaaagctggctctgagc
acagaatcatctgcttcgccgaccccccaagcctactcctcggcaagtgaatattcgacg
ccgcttactagcaatgttgcgacgccagtacctaccgaggcccccttgactgttccaggg
aagatgatcgaggtggtacttaccactcggagagcccgtgctagaccttcaaaggtcccc
gaagacgacccatactctgtcgcacccaagcgcaagagaaatgtcatcgaggacagtgag
gaagagctctcggactattccccagatgctgagcttgcgcggaggttgcagaaggaggaa
gacgctgccgctgccaatttcgcgatcccctctctccaaacaaaggctaaaccccgatct
cggcgagccggtctaactaagggcaagaccgaggccatgctcacttctccacatgcacgt
gcacccgttcgccgttatgggaagaagaatgaggaggtgcctcttccacaaacatcaaag
acgcgagtgggtgttaagagacccgccatcgtttcagattcagaggatgacgacgacgac
gaggatgatgacgactttgaagaggtcgacagcgatgactctcttccgttgatcaagacg
cgagcagcaagaccaccaaccggtccaatcaggaaccacgatctcaacgtggctgaaggt
gagagcgagatctctgaagacgactttgatggcaccgccgacgatgttagcgacgacgat
ggcagcaacatcgcgtctgaagttggcagcaccgctggagccccaactaataggggcaat
tcggctattcgcacagccatggccaatcgacgcgcttacagatcttatgcgaattctcga
cgtgttaggaatgatcgtcgtcgtcttgagaaaaatcaccccgagctcacgacaatgtgg
gaggatctgaagaatatgcccattttgaaggctggaaaggcggcgcagccaacgtccatt
tctcgccagctgaagcctttccagcttgagggattggcttggatgcaggcgatggaaaag
accgagtggaaggggggccttctgggtgatgagatgggccttggcaaaacaatccaggcc
gtttccctcatcatgtccgacttcccgcagccaaagccgacactggtgctcgtccctcca
gttgctctgatgcaatggatgactgagattgaatcctataccgacggcacactgaagacg
cttgtctatcacggcacaaacgccaagtccaagaacatcaaggtgaaagatattaagaag
tatcatgtcatcatcatgtcctacaacagcttggagtcggtcttccgcaagcaagaaaag
ggatttaagcgccaaggaggtcttgtcaaggagaagtctgtcatccaccagaccgagttt
caccgcatcattcttgacgaggctcactccatcaagacgagaaccacgatgacagccaag
gcgtgcttcgccctcaaggtcacataccgatggtgcttgtccgggactcctctgcaaaat
cgcattggcgagtttttctccttgattcgtttcctcaatgtccgtccattcgcatgctat
ttatgcaagcactgtccctgtaagacaatggaatggtctatggacgaggacagtcgctgc
accgagtgcaagcatggaggcatgcagcatgtttcggtcttcaaccaggagctgctcaac
ccgatccaaaagtacgggaatcgtggagagggcgccgaggccttcaagaagttgcgcgtc
ctgacggatcgaatcatgctccgtcggctcaaaaaggaccacaccgactcgatggagctg
cctgtgaaggagatcaatgttgaacgtcagtttttcggcgaagctgagaacgatttcgca
aactcgatcatgaccaacggtcaacgcaaattcgatacctatgtggccaccggtgttctc
ctcaacaactatgccaatatcttcggcttgatcatgcagatgcgccaggtcgctgatcac
ccggatttgctcctgaagaagcacagcgagggcggccaaaacgtcatcgtgtgcgccata
tgcgacgagactgcggaggatgccatccgatctaggtgcaagcatgacttctgccgcaca
tgtgtcaagagttacctgaattcggcagaggagcccaactgcccacaatgccacattccc
ctctcgattgatcttgagcagcccgagattgagcaggacgagaccatggtcaagaagtcc
tcgatcatcaaccggatcaagatggagaattggacgtcctcgtccaagattgagcttttg
gtccacgagctccacaagctgcgctcggacaatgcctctcacaagtcgatcatattttca
cagttcacaaccatgcttcagctcatcgagtggcgtctccgccgtgcgggtatcaccact
gtgatgcttgatggtagcatgacacctgctcagagacaggcttcgattcatcatttcatg
accaatccggatgtagaatgcttcctcgtctcgctcaaggctggtggtgtagcgctcaac
ttgacagaggcgtctcgcgtctttattgtcgatccctggtggaatcccgcagctgagtgg
cagagcgccgatagatgccaccgcatcgggcagacgcgaccctgcacgatcacgagactg
tgcatcgaagattcggtagagagccgcatggtgctcctgcaagagaagaagaccaacatg
atcaactcgactatcaactcggacgatgccgccatggactcgctgagtccagaggacctg
cagttcttgttccgtggcagctga
DBGET
integrated database retrieval system
