Paenibacillus psychroresistens: EHS13_18960
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Entry
EHS13_18960 CDS
T06328
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHS13_18960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_18960 (nth)
Enzymes [BR:
ppsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EHS13_18960 (nth)
DNA repair and recombination proteins [BR:
ppsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EHS13_18960 (nth)
Prokaryotic type
EHS13_18960 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QGQ96811
UniProt:
A0A6B8RK64
LinkDB
All DBs
Position
complement(4205834..4206511)
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AA seq
225 aa
AA seq
DB search
MNQKQMRYALDTIGQMFPDAHCELNHSNPFELTLAVLLSAQCTDETVNKVTANLFVKYRK
PEDYLAVPVEELEQDIRRIGLFRNKAKNIQSLCAMILEKYDGQIPESHEQLVELPGVGRK
TANVVISNAFGVPAIAVDTHLERVSKRLGIAKHLDSVLEVEKKLMKLVPREEWTLTHHRL
IFFGRYHCKAQNPKCEICPLLETCTEGKKRMKLPQVRKSKDKAIN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaagcaaatgcgttatgctctcgatacaattggccaaatgtttcccgatgct
cactgcgaattaaatcatagtaacccgtttgagctaactcttgctgtgttgctttctgca
caatgcacggatgagactgtgaataaagtgactgcaaacctttttgttaaataccgcaaa
ccagaggattacttggctgttccggttgaagagcttgagcaagatatccggagaattggt
ttgtttcgcaataaagcgaagaacatccaaagcctttgcgcgatgatattagaaaaatac
gatgggcaaattccagaaagccatgagcagttggttgagcttccaggagtagggcgcaag
acagcaaatgttgtcatttcaaacgcttttggtgtacctgctatagcagtagacacccat
cttgagcgagtatcgaaacgacttggcattgctaaacatttagattccgtacttgaggtt
gaaaagaagcttatgaagttagtgcctagagaagaatggacattaactcatcatcgactt
atttttttcgggagataccattgtaaagctcaaaaccccaaatgtgagatatgtccctta
ttagaaacctgcactgaaggaaaaaaacgtatgaaattaccacaagttaggaaatctaaa
gataaagctattaattag
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