KEGG   Podospora pseudocomata: 87905158
Entry
87905158          CDS       T09797                                 
Symbol
smb1
Name
(RefSeq) Small nuclear ribonucleoprotein-associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87905158 (smb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    87905158 (smb1)
   03041 Spliceosome [BR:ppsd03041]
    87905158 (smb1)
   03032 DNA replication proteins [BR:ppsd03032]
    87905158 (smb1)
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     87905158 (smb1)
Spliceosome [BR:ppsd03041]
 Complex A
  U1 snRNP components
   Sm proteins
    87905158 (smb1)
  U2 snRNP components
    87905158 (smb1)
 Complex B
  U1 snRNP components
    87905158 (smb1)
  U4/U6.U5 tri-snRNP components
    87905158 (smb1)
 Complex C
  U2 snRNP components
    87905158 (smb1)
DNA replication proteins [BR:ppsd03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     87905158 (smb1)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 87905158
NCBI-ProteinID: XP_062748201
UniProt: A0ABR0GU01
LinkDB
Position
1
AA seq 197 aa
MRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRIKRKQNKPSAPGASSSGAQTIEQEEK
RTLGLTIVRGAHIVSLSVESPPPADPSARLGKTGGPSVASALAAGPGVARPAGRGAAAPI
SLAGPAAGIGGAVPPPAFPGFPGAPGFPGAPGRGAPPPPGFGGGFPPAGFPGAPGGFPPG
FPPGGGPPSGFNPPPRR
NT seq 594 nt   +upstreamnt  +downstreamnt
atgcgcgtaacgctgaatgatggccgccagatgacgggtcagatgctcgctttcgataag
cacatgaaccttgtgctcgccgataccgaagagttccgccggatcaaaaggaagcaaaac
aagccctccgcccccggcgcatcatcatccggcgcgcagaccatcgagcaggaggagaag
cggacactgggtctgacgatcgttcgaggcgcccacattgtatccctttccgtcgaatcg
ccgccgccggctgacccaagcgctcgtttgggcaagactggcggtcccagtgttgcctct
gcgctcgcagcgggacctggtgtcgcaagaccggctggccgcggcgccgctgctcccatt
tcccttgccggccctgctgctggtattggcggcgccgtccctcccccagctttcccaggc
ttccctggtgctcccggttttcctggcgcccctggccgtggtgctccccctccaccagga
tttggaggtggattccctcctgctggctttcccggcgcgcccggtggcttcccccctgga
ttccctcccggcggtggccctccttctggcttcaaccctcctcctcgccgttaa

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