Podospora pseudocomata: QC762_108980
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Entry
QC762_108980 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_108980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_108980
Spliceosome [BR:
ppsd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
QC762_108980
Complex C
U5 SnRNP specific factors
QC762_108980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Motif
Other DBs
NCBI-GeneID:
87905226
NCBI-ProteinID:
XP_062748274
LinkDB
All DBs
Position
1
Genome browser
AA seq
985 aa
AA seq
DB search
MDDDLYDEFGNFIGEAEASEEESEHGVDAGNYAYDDYPEEAPEATGQELMEIDDDGPSNA
VILHEDKQYYPTAAQVYGEGVETMVQEEDAQPLTQPIIAPVEQKKFSIEEADLPPVFFDR
SFMTDLMNYPEQIRNVALAGHLHHGKTAFMDMLVLETHNINDRLEQRTGKKRDEQLRYTD
VHVLERERGLSIKASPMSLVLPNTKGKSHLVNIIDTPGHVDFVDEVAAAFRLVDGVCLVV
DVVEGVQVNTEQIIKHAVLEDIPITLIVNKMDRLVLELKLPPNDAYYKLKHVIEEVNTVI
ENTIPGKGESKRVSPERGNVLFACTSMGWCFTLKSFAKMYSDSFGGVNIGEFAKRLWGDV
YFNPRKRSFTRKPVDEGAKRSFVNFILEPIYKIYSHTISESPEDLKGTLAKLGIQLKPSQ
YKTDPKVLLKLVCEQFFGPSTGFVDMVCEHIPSPVEAAQKKLERYYTGPLDTKVAESMKA
CDQNGPLVIYVTKLFNTADAKSFNAFGRVMSGIAQPGTEVRVLGEGYSIDDEEDMVVARV
AEVFIAETRYNIPTDGVPAGNWVLLGGVDNSIVKTGTIVAKQFEDDEDAYIFKPLTHLTE
SVLKVAVEPINPSELPKMLDGIRKINKSYPLVTTKVEESGEHIILGTGELYMDCVLHDLR
RLYADMEVRVSDPVVRFCETVQDMSATKCYAITPNKKNTITMVAEPLDDGIAKDIESGAV
RIRDPPRKTAKFFVDKYDWDLLAARSIWAFGPEEMGPNILQDDTLPGEVDKKRLATVKES
IRQGFAWATREGPLCEEPIRNTKFRLIDVALAQETIFRGGGQIIPTARRACYSSFLMASP
RLMEPLYSVSMTGPQDSVSMVYNILARRRGHVLSDGPIAGTPLYRVNGLIPVIDSFGFET
DLRINTPGQAMVSLVFDRWNMVPGDPLDKEQVTRPLQMASAQATARDFVLKTRRRKGLSE
DVSVAKFLEREFYESLVGSGTLGEA
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatctttatgacgagtttggaaacttcatcggcgaggccgaggcttccgaa
gaagaatccgaacatggcgtggatgcgggcaactacgcttacgatgactatcctgaggag
gcaccagaggccactggccaggaattgatggagattgacgatgatggtccatccaacgcc
gtgatcctccacgaagacaagcagtactatccgacggcagcccaggtgtatggcgagggg
gttgagacgatggttcaggaggaggatgcgcaaccactaacacagcccatcatcgccccc
gtcgagcagaagaagttcagcatcgaggaggccgaccttccaccagtgttcttcgaccgc
agtttcatgaccgatctcatgaactatcccgaacagattcgaaatgtcgccctggccgga
cacctgcaccacggaaagacggcgtttatggatatgctggtattggagacgcacaacatc
aacgacaggctagaacagaggacagggaagaagcgggacgaacaactcagatataccgac
gtacatgtgctcgagcgggaaagaggattgtcaatcaaggcgtcgcccatgagcttggtt
ctccccaacaccaagggcaagtcccatctcgtcaacattatcgacacacccggccatgtg
gatttcgttgatgaggttgccgcggcgtttcggctggtggacggtgtttgcttggtggtg
gatgtggtggagggcgttcaggtcaacacagagcaaatcatcaaacatgccgttctcgag
gatatcccgatcacgttgatcgtcaacaagatggatcgcttggttctcgaactgaagctg
ccacccaacgacgcctactacaagctcaagcacgtcatcgaagaggtaaacactgttatc
gagaacacgatccccggcaagggcgagtcgaagagggtcagtccagagagaggcaatgtg
ctgtttgcatgcacttcgatgggctggtgctttaccctgaagtcgttcgccaagatgtac
tccgacagcttcggaggcgtcaacatcggggagttcgctaaacggttatggggtgatgtc
tacttcaacccacggaaacggagcttcacaaggaaacccgtcgatgaaggtgctaagcgg
tcctttgtcaacttcattctcgagcctatctacaagatctattctcacactattagtgag
agcccggaggatctcaagggtactcttgcgaagcttggcatccaactcaagccttcccag
tacaagacggatcccaaggttctgttgaagctggtttgcgagcagttctttgggccatcg
accgggttcgttgatatggtctgcgagcacattccttctccagttgaggcggcccagaag
aagctcgagcgctactacaccggtcctctcgacacaaaagttgccgagtcgatgaaggct
tgcgatcaaaacggacctctggtcatctatgtcacaaagctgttcaacacggctgatgcc
aagagcttcaatgcttttgggagagtgatgagcggtattgctcagccagggaccgaggtt
cgggtattgggcgagggctactcgatcgacgacgaggaagacatggtcgtggccagagta
gccgaggtcttcattgccgaaactcgatacaatatcccaaccgatggagtccctgctggg
aactgggttttgctgggcggcgttgacaattcgatcgtgaagacgggtacgattgtcgcc
aagcagttcgaggatgacgaagacgcctacatcttcaagcctctcactcacctgaccgag
tctgttctgaaggttgcggtggagcccatcaacccgtcggaactgccaaagatgctggat
ggaattcgaaagatcaacaagagctatcctttggtgactacgaaggtggaggagtctggc
gaacacatcattctcggaaccggtgaactctacatggattgtgtgctgcacgacttgcgc
cgtctctacgccgacatggaggtcagagtatcggatcccgtcgtccgattctgtgagacg
gtacaggacatgtcagccaccaagtgctatgccatcacaccaaacaagaaaaacaccatc
accatggtggccgagccattagatgatggcatcgcaaaggacatcgagtcaggggccgtg
aggatacgggacccgcctcgaaagacggccaaattcttcgtcgacaagtatgactgggac
cttttggcggccagaagcatctgggcctttggaccggaagagatgggtccaaatattctc
caagacgacacattgccaggagaggtcgacaagaaacgattagccacggtgaaggagtcg
attcgtcagggttttgcttgggccacccgagaaggcccactatgcgaagaaccaatccgc
aacaccaagttccgcctcatcgacgttgccctggcgcaggaaaccatcttccgtggcggc
ggccagatcatccccacggcccgcagggcgtgctactcgtcctttttgatggcctccccc
aggctgatggagccgctctactcggtctcgatgactggacctcaggactcggtgtcgatg
gtgtacaacattttggccaggaggaggggccatgttttgtcggatgggcccatcgcgggc
acgccgctttatagggtcaatgggttgataccggtgattgatagttttgggtttgagacg
gatctgaggatcaacacgccggggcaggcgatggtgagcttggtgtttgaccggtggaat
atggtgccgggggatccgctggacaaggagcaggttacgaggccgctgcagatggcaagc
gcgcaggcgacggcgagggattttgtgctcaagactaggaggaggaaggggctgagtgag
gatgtgagtgtggctaagtttttggagagggagttttatgagagtttggtggggagtggg
actttgggggaggcttga
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