Podospora pseudocomata: QC762_202170
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Entry
QC762_202170 CDS
T09797
Symbol
NTH1_1
Name
(RefSeq) alpha,alpha-trehalase nth1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QC762_202170 (NTH1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_202170 (NTH1_1)
Enzymes [BR:
ppsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QC762_202170 (NTH1_1)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QC762_202170 (NTH1_1)
Prokaryotic type
QC762_202170 (NTH1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
87907013
NCBI-ProteinID:
XP_062746894
LinkDB
All DBs
Position
2
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AA seq
600 aa
AA seq
DB search
MRTSRVARETARLFETAASTSTPLRRSSRTSTLAARFSYNTNASPSAAMTKVEESDVEVD
DDVKLSLGSDIEDAITTTRAAKRRRTVTTAVTTQTINSSPHRRTTRVKVERTAVKSEGGS
DSDFLSSLSDNEDIKTAIKEESKPVVPRGRARKPARRVTSPSGTTTISPPSDWEEVYNLV
KEMRINGPAANAAVDTMGCERLADPSSTVKDRRFHTLVALMLSSQTKDTVNAEAMKRLHT
ELPPFEPGAPAGLNLNNMLHCPPAVLNELIGKVGFHNNKTKYLLQTAQILKDKFNGDIPP
TIEGLVSLPGVGPKMAHLCMSAENGWNRVEGIGVDVHVHRITNYWGWNGPKETKTPEETR
MALQSWLPKDKWKEINWLLVGLGQSVCLPVGRRCGDCEVGLKGLCKAADRKKVNEGKKRR
EGVKKEEELVEKTEIKGDDEGGTAAKREQQRVVKMEVVDEGMPPPPSDTQPEPTPQPDPE
SNVAIPSVEQDVKPIIKDEEDVEMARSVPIKTDGDDLDEDMVKKEEEDAVRIDQSSHQPE
DVEMSDSPEVKVGIQLEPRRRRRIPAAIPSRGQSEDPPLEESDAEVKVEPRARGQGRSQD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgtcgcgcgtggctagggagaccgcacgactctttgagactgcggcctcgact
tcaacaccgctccggcgatcatccagaacctcgactttggccgcgcgattctcttacaat
accaacgccagccccagcgcagctatgacaaaggtcgaagaaagcgacgtcgaagtcgac
gatgacgtcaaactatcccttggttcagatattgaagatgcgatcacgacaaccagggcg
gccaagcgccggcgcaccgtgaccactgcagtcaccacacaaaccatcaactcttcgcct
caccggcgaaccactagagtaaaggtagagcgcacggctgtcaaatctgaaggtggctcc
gattccgactttctctcttccctctccgacaacgaggacatcaagaccgccatcaaggaa
gagtccaagcccgtcgtgccccgcggccgcgctcgaaaaccagcccgccgagtcacctcc
ccgtccggcacgaccaccatatccccaccttccgattgggaggaggtttacaacctcgtc
aaagagatgcgcatcaacggcccagccgccaatgccgcggttgatacaatgggctgtgag
cgccttgccgacccctcctctacagtcaaagaccgccgctttcacacacttgttgcgttg
atgctttcctcccaaaccaaggataccgtcaatgctgaagcgatgaagcgtcttcatacc
gaactcccgccgttcgagcctggtgcaccagctgggttgaacctcaataacatgctccac
tgcccccctgccgttctgaacgagctcattggcaaagtcggctttcacaacaacaagaca
aagtacctacttcaaacggcgcagattttgaaggacaagttcaacggggatatcccgcct
acgattgaggggttggtgtcactgccaggtgtagggcccaagatggcgcacttgtgcatg
agtgccgagaatggatggaacagagtggagggcattggtgtcgatgttcacgttcaccgg
atcacgaactactgggggtggaatggacctaaagagaccaagacaccagaggagacgaga
atggcgctgcagagctggttgcccaaggacaagtggaaggagatcaactggttgttggtt
gggctagggcagagtgtctgcttgcccgttgggagaagatgtggagactgtgaggttgga
ttgaaggggctgtgcaaggcggcggataggaagaaggtgaacgagggaaagaagagacgg
gagggggtaaagaaggaggaggagttggttgagaagactgagatcaagggggatgatgag
ggtggaacggcggctaagagagagcagcaaagggtggtcaaaatggaggttgtggatgag
gggatgcccccgccgccgagcgatacccaacccgagccgacgccacaacctgatcccgag
tcgaacgttgccatcccctccgtcgagcaggacgttaagcccatcatcaaggatgaagag
gatgttgagatggcgcgcagcgtgcctatcaaaactgacggcgatgatctcgatgaggac
atggtcaagaaagaggaggaggatgccgtcagaatcgatcagtcgagccaccaacccgag
gacgtcgaaatgagcgatagccccgaggtcaaagtcgggatccagctcgagccccgaaga
cgtcgtcgtatccccgctgcgatcccctcccgaggccaatctgaagaccccccattggag
gaatccgatgccgaagtcaaggtcgagccacgagcccgaggtcaaggtcgaagtcaagac
tga
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