Pseudomonas psychrophila: G5J76_07885
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Entry
G5J76_07885 CDS
T06988
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5J76_07885 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_07885 (nth)
Enzymes [BR:
ppsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G5J76_07885 (nth)
DNA repair and recombination proteins [BR:
ppsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5J76_07885 (nth)
Prokaryotic type
G5J76_07885 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF4817
Motif
Other DBs
NCBI-ProteinID:
QIE32180
LinkDB
All DBs
Position
complement(1742606..1743244)
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRFHEDNPEPKTELAYSSAFELLIAVILSAQATDVSVNKAMAKLFPVANT
PEAIYALGVEGLSQYIKTIGLYNSKAKNVIETCRLLIERHGSQVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIAPGKNVVEVEKNLMKHVPKPYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEFKQKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaagcgccttgaaatattccgccggtttcacgaagacaatcctgagcca
aaaaccgaactggcctattcatctgctttcgaactgttgattgccgtgatcctgtccgct
caggccactgatgtgagcgtgaacaaggcgatggccaaattgtttccggtcgccaacaca
ccagaagccatctacgctctcggagtagaaggtctgtcgcagtacatcaagaccattggc
ctgtataacagcaaggccaaaaacgtgattgaaacctgtcgtctattgattgagcgccat
ggcagccaggttccgcagacgcgagaagagcttgaggcgctacccggagtaggtcgaaaa
actgcaaatgttgtgctcaacaccgccttcagacaactgaccatggccgtagacacccat
attttcagggtcagtaatcgaaccggaattgcaccaggcaaaaacgtggtcgaggtcgaa
aagaatttaatgaagcacgtgcccaagccgtatctgctggacgcccaccattggctcatc
ctgcatggacgttatgtgtgccaggcgcgcaagccgcggtgtggaagctgtcgcattgaa
gacctgtgcgaattcaagcaaaaaacctctgatgattga
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