Pseudomonas oryzihabitans PRS08-11306: BJP27_17870
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Entry
BJP27_17870 CDS
T05074
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl01501
beta-Lactam resistance
ppsl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BJP27_17870
01503 Cationic antimicrobial peptide (CAMP) resistance
BJP27_17870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsl03036
]
BJP27_17870
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_17870
01504 Antimicrobial resistance genes [BR:
ppsl01504
]
BJP27_17870
Chromosome and associated proteins [BR:
ppsl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BJP27_17870
Transporters [BR:
ppsl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BJP27_17870
Antimicrobial resistance genes [BR:
ppsl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BJP27_17870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
HH_YBHG
HH_EMRA
BSH_CzcB
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
APQ13273
LinkDB
All DBs
Position
3967828..3969021
Genome browser
AA seq
397 aa
AA seq
DB search
MQIKPAHAYFAPALLAIALALGACGKQENKEQPQQQQKPVAVGVVTIEPRTVTLTDELPG
RTSAFRIAEVRPQVSGILLKRNFIEGGDVKAGQQLYQIDPRTYEANVNSAKASLAQAQAT
LASNRLKAQRYAALVKDQAISKQEADDALSVQRQNEAQVESAKAALRNAEINLAYTKVAA
PISGRIGRSMMTEGALVTADQTSALTSITQLDPIYVDVTQSATDLLRLRRELDNGQLQRV
QGEEAAQVKLVLEDGSAYSRPGKLKFTEVSVDPSTGSVVIRAEFPNPDKLLLPGMFVRAR
LQAGVRQDALLVPQQGVTRDIKGQPTAMVVNAEGKVEQRVLKTERTVGSDWLVTEGIKPG
DKVITEGLQKVRPGATVTATPASNVASAGQPPAGQGQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaagccggcgcatgcctatttcgctcccgccctgctggccattgccttggcc
ctgggcgcctgtggcaagcaggagaacaaggaacagccacaacagcagcagaagccggtc
gcagtcggcgtggtcaccatcgaaccgcgcaccgtgacgctgaccgacgaactgcccggc
cgcacctcggccttccgtatcgccgaggttcgcccccaggtgagcggcatcctgctcaag
cgcaacttcatcgagggcggtgacgtcaaggccggccagcagctctatcagatcgatccg
cgtacctacgaggccaacgtcaactcggccaaggcctccctggcccaggcccaggccacc
ctggcctccaaccggctcaaggcgcagcgctacgctgccctggtcaaggaccaggcgatc
agcaagcaggaagccgacgacgccctgtccgtgcagcggcagaacgaggcccaggtggaa
tcggccaaggcggccctgcgcaacgccgagatcaacctggcctacaccaaggtcgccgcg
cccatctccggccgtatcggccgttcgatgatgaccgaaggcgccctggtcaccgccgac
cagaccagcgccctgaccagcatcacccagctcgatcccatctacgtcgacgtgacccag
tccgccaccgatctcttgcgtctgcgccgcgaactggataacggccagctgcagcgggtg
cagggcgaagaggccgcccaggtcaagctggtgctggaagacggcagtgcctacagccgg
cccggcaagctgaaattcaccgaggtctcggtggacccgagcaccggctcggtggtgatt
cgcgccgaattccccaaccccgacaagctgctgctgcccggcatgttcgtgcgcgcccgg
ctgcaggccggggtgcgtcaggatgccttgctggtaccccagcagggcgtgacccgcgac
atcaagggccagcctaccgccatggtggtgaacgccgagggcaaggtggagcagcgggtg
ctcaagaccgagcgtaccgtcggcagcgattggctggtcaccgagggcatcaagccgggt
gacaaggtcatcaccgaaggcctgcagaaggtccgccccggtgccaccgtcaccgccacg
ccggcgagcaatgtcgcctccgccggccagccgccggcgggtcagggtcagtaa
DBGET
integrated database retrieval system
