Planktothrix pseudagardhii: NO713_03079
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Entry
NO713_03079 CDS
T08299
Symbol
yodJ
Name
(GenBank) Putative carboxypeptidase YodJ
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu00550
Peptidoglycan biosynthesis
ppsu01100
Metabolic pathways
ppsu01502
Vancomycin resistance
ppsu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NO713_03079 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NO713_03079 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NO713_03079 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppsu01002
]
NO713_03079 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsu01011
]
NO713_03079 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ppsu01504
]
NO713_03079 (yodJ)
Enzymes [BR:
ppsu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
NO713_03079 (yodJ)
Peptidases and inhibitors [BR:
ppsu01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
NO713_03079 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsu01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
NO713_03079 (yodJ)
Antimicrobial resistance genes [BR:
ppsu01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
NO713_03079 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
CAD5959093
UniProt:
A0A9W4D7U4
LinkDB
All DBs
Position
I:3638860..3639723
Genome browser
AA seq
287 aa
AA seq
DB search
MKNSSLPKQAETVVDGSTEEIPEAIRDLPVVTVASSRPSPRPGLFWKMLGLAVVAFCTAL
AINYQFGILSPKAYIPLLEPTPEPKSSTASSPSPTPSASATPSAAASPTASPSLPDNLLG
HLPYEEAPAAELESITPDGSHRLRKAAAQAYQQMEQAALASGVSLVPISSFRTVKEQEGI
FFEVKAQRGQVATKRAEVSAPPGYSEHHTGYAIDIGDGNMPSTNLNVSFEQTQAFQWLKD
NAAFYSFELSFPKDNPQGVSYEPWHWRFVGDRQSLETFYKARKLKKS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaattctagtctgcctaaacaagccgaaactgtcgtggatggatcaacagaagag
attccagaggcgatacgagatctccccgttgtgaccgtggcttcctcccgaccgtccccc
agacccggactcttctggaaaatgttggggttagccgtcgttgcattctgtacggcttta
gccattaattatcaatttggaattctctctcctaaagcttatattcctctgttagaaccc
accccagaacccaagagttctacggcttcttccccttcacctactcccagtgcttcagca
actccaagcgccgccgcgtccccaacagcctccccaagcttaccggacaatttattgggc
catctcccctacgaagaagctcccgccgcagagttagaaagtattacccccgatgggagt
catcggttacgcaaagcagccgcccaagcttatcagcaaatggagcaagcggctttagcc
agtggggtgagtttagttccgatttccagttttcgcacggttaaagaacaggaaggaatc
ttttttgaagtcaaagcgcaacggggacaagtcgcaaccaaacgcgcagaggtaagcgcg
cctccgggatatagtgaacatcatacgggttatgccattgatattggcgatggaaatatg
ccctcaacgaacttaaatgtcagttttgaacaaactcaagcttttcaatggttaaaagat
aatgccgctttttatagttttgagttatcctttcctaaagataatccccaaggggtgagt
tatgaaccttggcattggcggtttgtcggagatcgccagagtttggaaacgttttataaa
gccagaaagctgaagaaaagctga
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