Pseudomonas putida S16: PPS_3992
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Entry
PPS_3992 CDS
T01570
Name
(GenBank) radical SAM domain-containing protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00790
Folate biosynthesis
ppt01100
Metabolic pathways
Module
ppt_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PPS_3992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppt03016
]
PPS_3992
Enzymes [BR:
ppt01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PPS_3992
Transfer RNA biogenesis [BR:
ppt03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPS_3992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AEJ14533
LinkDB
All DBs
Position
complement(4513086..4513652)
Genome browser
AA seq
188 aa
AA seq
DB search
MRLTGCPLRCQYCDSAYAFSGGTVRTLDSILEQVAGFKPRYVCVTGGEPLAQPNALPLLQ
RLCDAGYEVSLETSGALDIAGTDTRVSRVVDLKTPGSEESHRNRYENIEQLTRNDQVKFV
ICSREDYDWAVSKLIQYNLAERAGEVLFSPSHHQVNASELADWIVADNLPVRFQLQLHKL
LWNDEPGR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcaccggttgccccctgcgctgccagtactgtgacagtgcctatgccttcagt
ggcggcaccgttcgcaccctcgattcgatccttgagcaggtcgccggcttcaagccgcgc
tacgtttgcgtcaccggcggcgagccattggcccagcccaacgccttgccgctgttgcag
cgcctgtgtgacgccggttacgaggtgtcgctggaaaccagcggcgcgctggatattgcc
ggcaccgacacccgcgtcagccgcgtggtcgacctgaagaccccaggctccgaagagtcg
caccgtaaccgctacgagaacatcgagcagctgacccgcaacgaccaggtcaagttcgtc
atctgttcccgtgaggactatgactgggcggtctccaagctgatccagtacaacctggcc
gagcgtgccggcgaggtgttgttctcgcccagccaccaccaggtgaacgccagcgagctg
gcggactggatcgtcgccgacaacctgcccgtacgcttccagctgcagctgcacaagctg
ctgtggaacgacgaacccggacgttga
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