Pseudomonas putida KT2440: PP_2080
Help
Entry
PP_2080 CDS
T00114
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00220
Arginine biosynthesis
ppu00250
Alanine, aspartate and glutamate metabolism
ppu00430
Taurine and hypotaurine metabolism
ppu00910
Nitrogen metabolism
ppu01100
Metabolic pathways
ppu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PP_2080 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PP_2080 (gdhB)
00220 Arginine biosynthesis
PP_2080 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
PP_2080 (gdhB)
Enzymes [BR:
ppu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
PP_2080 (gdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
PAS_3
DUF948
Motif
Other DBs
NCBI-ProteinID:
AAN67694
UniProt:
Q88L55
LinkDB
All DBs
Position
2367183..2372048
Genome browser
AA seq
1621 aa
AA seq
DB search
MAFFTAASKADFQHQLQAALAQHISEQSLPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRIIERFDPEYPQVRVYNPDYERNGWQSTHTVVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGAKGELLELLPKGTQGEGVRYESLMYLEIDRCANAAELTVLTREIEQ
VLAEVRVVVADFEPMKAKLREVVAQVEQTAFGPAQNEKGEVKAFLEWLLDNHFTFLGYEE
FTVKGDADGGQMVYDEQSFLGLPRRLRVGLTAEELRIEDYAVAYLNEPLLLSFAKAALPS
RVHRPAYPDYVSIRQLDADGKVIKEHRFMGLYTSSVYGESVHAIPYIRVKVAEVERRSGF
DPKAHLGKELAQVLEVLPRDDLFQTPIDELFSTVMAIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPREIYSTEVRQKIQQVLMERLKASDCEFWTFFSESVLARVQLILRVDPKNRIDID
PQQLEREVIQACRSWHDDYSALVVENFGEAQGTNILADFPKGFPAGYRERFAAHSAVVDL
QHVLNLSESKPLAMSFYQPLTQVGERILHCKLYHADTPLALSDVLPILENLGLRVLGEFP
YRLRHANGREYWIHDFAFTYSEGLSLDIQQLNDTLQDAFIHIVRGDAENDAFNRLVLTAG
LPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTQDD
LDDKQQRLEQAILSALDDVQVLNEDRILRRYLDLIKATLRTNFYQPDANGQNKSYFSFKF
NPKLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQ
VKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGVACYRIFISGLLDITDNLKDGGVVPPA
NVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAR
GAWVGVQRHFRERGINVQEDPITVIGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDP
NPDPATSFAERKRLFDLPRSAWSDYDTSIMSEGGGIFPRSAKSIAISPQMKERFAIEADR
LTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEG
GNLGMTQLGRVEFGLNGGATNTDFIDNAGGVDCSDHEVNIKILLNEVVQGGDMTEKQRNQ
LLGSMTDEVAGLVLGNNYKQTQALSLAARRARERIAEYKRLMADLEARGKLDRAIEFLPS
EEQLAERLAAGQGLTRAELSVLISYSKIDLKEQLLKSLVPDDDYLTRDMETAFPPSLVSK
FAEAMRRHRLKREIVSTQIANDLVNNMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLP
HWFRQIEALDYQVPAEIQLTLMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPKIAQL
GLKLDELLEGPTRERWMVRYQGFVDAGVPELLARMVAGTSHLYTLLPIIEAADVTGHEPA
QVAKAFFAVGSALDLTWYLQEISNLPVENNWQALAREAFRDDIDLQQRAITISVLQMADA
PQDMDARVALWSEQHRGMVERWRAMLDDLRNATGTDYAMYAVANRELVDLAMSGQAAVVP
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaaagccgacttccagcatcaactgcaagcggccctg
gcgcagcacatcagcgaacagtccctgccacaagtggcgctgttcgccgagcagttcttc
ggcatcatctctctggacgaactcacccagcgcaggctttccgacctggccggctgcacc
ctgtcagcctggcgcatcatcgagcgtttcgaccccgaatacccgcaagtgcgggtgtac
aaccctgattacgaacgcaatggctggcagtcgacccataccgtggtcgaagtgctgcac
catgacctgccgttcctggtcgactcggtgcgcaccgagctcaaccgccgtggctacagc
atccacaccctgcaaaccaccgtgctcagcgtgcgccgtggcgccaagggcgagctgttg
gagctgctgcccaagggaacccagggcgaaggcgtgcgctacgagtcactgatgtacctg
gagatcgaccgctgcgccaatgccgccgagctgacagtgctgacccgcgagatcgagcag
gtgctggccgaggtacgggtggtggtggccgacttcgaaccgatgaaggccaagctgcgt
gaagtggtagcgcaggtggagcaaaccgcctttggccccgcccaaaacgagaaaggcgaa
gtcaaggccttcctcgaatggctgctggataaccacttcaccttcctgggctatgaagaa
ttcaccgtcaagggcgacgccgatggcggccagatggtctacgacgagcagtcgttcctc
ggcctgccgcgccgtctgcgcgtgggcctgaccgcagaagagctgcgcatcgaagactac
gctgtggcctacctcaacgagccgctgctgctgtcgttcgccaaggccgcactgcccagc
cgcgtgcaccgcccggcctacccggactacgtgtcgatccgccagctggacgccgacggc
aaggtcatcaaggagcaccgcttcatggggctgtacacctcgtcggtgtatggcgaaagc
gtgcatgccattccgtacatccgcgtgaaggtggccgaagtcgagcgccgttcgggcttt
gatcccaaggcccacctgggcaaggaactggcccaggtgctggaagtgctgccgcgcgac
gacctgttccagacgccgatcgacgagctgttcagcacggtcatggcaatcgtgcagatc
caggagcgcaacaagatccgcgtgttcctgcgtaaagacccgtatggccgcttctgctac
tgcctggcctacgtcccgcgtgaaatctattccaccgaagtacggcagaagatccagcag
gtgctgatggagcgcctgaaggccagcgactgcgagttctggaccttcttctccgaatcg
gtactggcccgtgtgcaactgatcctgcgggtcgaccccaagaaccgtatcgacatcgac
ccgcagcagctggaacgcgaagtcatccaggcctgccgctcgtggcatgacgactactcg
gcactggtggtggagaacttcggcgaagcccagggcaccaacatcctcgccgatttcccc
aaaggcttcccggccggttaccgcgagcgcttcgccgcgcactcggcggtggtcgacctg
cagcatgtgctgaacctgtcggaaagcaagccgctggccatgagcttctaccagccgttg
acccaggtgggcgagcgcatcctgcactgcaagctgtaccacgccgacaccccgctggcg
ctgtccgacgtgctgccgattctggaaaacctcggcctgcgcgtgctcggcgagttcccg
taccgcctgcgccatgccaatggccgcgaatactggatccacgacttcgccttcacctac
agcgaaggcctgagcctggacatccagcagctcaacgacaccctgcaggacgccttcatc
cacatcgtccgtggtgacgccgagaacgacgctttcaaccgcctggtgctcaccgccggc
ttgccgtggcgcgacgtggccttgctgcgtgcctacgcccgttacctgaaacagatccgt
ctgggcttcgatctgggctatatcgccagcaccctgaacaaccacaccgacatcgcccgt
gagctgacccggttgttcaagacccgcttctacctggcgcgcaagcttacccaggacgac
cttgacgacaagcagcagcgcctggaacaggccatcctgagcgccctggatgacgtgcag
gtgctcaacgaagaccgcatcctgcggcgctacctggacttgatcaaggccaccctgcgt
accaacttctaccagcccgacgccaacggccagaacaagtcgtacttcagcttcaagttc
aaccccaagctgatccccgaactgcccaaaccggtgccaaagttcgagatattcgtctat
tcgccgcgcgtcgagggcgtgcacctgcgctttggcaacgttgcccgtggtggcctgcgc
tggtccgaccgcgaagaggacttccgtaccgaagtgctggggctggtgaaagcccagcag
gtgaagaactcggtcatcgtgccggtcggcgccaagggtggtttcctgccgcgtcgcctg
ccgctgggcggcagccgtgacgagatcgccgccgaaggcgtggcgtgctaccgcatcttc
atttccggcctgctcgacatcaccgacaacctcaaggacggtggcgtggtgccgccggcc
aacgtggtgcgtcatgacgatgacgacccgtacctggtggtagcggccgacaaaggcacc
gcgaccttctccgacatcgccaacggcattgccatcgactacggcttctggcttggcgat
gcctttgcctcgggcggctcggccggttacgaccacaagaagatgggcattaccgcgcgc
ggcgcctgggtgggcgtgcagcgtcacttccgcgagcgtggcatcaacgtgcaggaagac
ccgatcaccgtcattggtgtgggcgatatggccggcgacgtgttcggcaatggcctgctg
atgtccgacaagctgcaactggtggctgcgttcaaccacctgcatatcttcatcgacccc
aaccccgaccctgccaccagctttgccgagcgcaagcgcctgttcgacctgccgcgttcg
gcctggagcgactacgacaccagcatcatgtccgaaggcggcgggatcttcccgcgcagt
gccaagagcatcgccatcagcccgcagatgaaagagcgcttcgccatcgaagccgaccgc
ctgaccccgaccgagctgctgaacgcgctgctcaaggccccggtggacctgctgtggaac
ggcggcatcggtacctacgtgaaggccagcactgaaagccacgccgatgtcggcgacaag
gccaacgatgcgctgcgggtcaacggtaacgaactgcgctgcaaggtagtgggcgagggc
ggcaacctgggcatgacccagctcggccgcgtcgagttcggcctgaacggcggcgccacc
aacaccgacttcatcgacaacgccggcggcgtggactgctccgaccacgaggtcaacatc
aagatcctgctcaacgaagtggtgcagggtggcgacatgaccgagaagcagcgcaaccag
ctgctgggcagcatgaccgacgaagtggccggcctggtgctgggcaacaactacaagcag
acccaggcgctttcgctggccgctcgccgcgcccgcgagcggattgccgagtacaagcgc
ctgatggccgacctcgaggcgcggggcaagctggaccgtgccatcgaattcctgccgtcc
gaagagcagttggccgaacgcctggctgccggccagggcctgacccgcgccgagctgtcg
gtgctgatctcgtacagcaagatcgacctcaaggagcaactgctcaagtcgctggtgccg
gacgacgactacctgacccgtgacatggaaaccgctttcccgccgtccctggtcagcaag
ttcgccgaggccatgcgccgccaccgcctgaagcgcgaaatcgtcagcacccagatcgcc
aacgacctggtcaacaacatgggtatcaccttcgtccagcgcctgaaggagtcgaccggc
atgagcccggccaacgtggccggtgcttacgtgatcgtgcgcgatatcttccacctgccg
cactggttccgccagatcgaggcgctggactatcaggtgccggcagagatccagctcacc
ctgatggacgagctgatgcgactgggccgccgagccacccgctggttcctgcgtagccgc
cgcaacgaacaggacgccgggcgcgataccgcgcacttcgggccgaagatcgcgcagctg
ggtctgaagctggatgagctgctcgaaggccctacccgcgaacgctggatggtccgctac
cagggctttgtcgacgccggtgtgccggagttgctggcgcgtatggtggcgggtaccagc
cacctgtacaccctgctgccgatcattgaagcggccgacgtgaccggccatgagcctgcg
caggtggccaaggcattcttcgccgtgggcagcgcgctggacctgacctggtacctgcag
gaaatcagcaacctgccggtggaaaacaactggcaggcgctggcgcgcgaggcattccgc
gacgatatcgacttgcagcagcgggcgatcaccatttcagtcctgcagatggccgatgca
ccgcaagacatggatgcccgcgtggcgctgtggtcagagcagcatcggggaatggtggag
cgctggcgcgccatgctcgacgacctgcgcaatgccacgggcactgactatgcgatgtac
gcggtggccaaccgcgagctggtcgacctggccatgagcgggcaggcagcggtggtgccg
tcctga
DBGET
integrated database retrieval system
