KEGG   Pungitius pungitius (ninespine stickleback): 119194263
Entry
119194263         CDS       T07626                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145  Phagosome
ppug04514  Cell adhesion molecules
ppug04672  Intestinal immune network for IgA production
ppug05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119194263
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119194263
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119194263
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119194263
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119194263
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119194263
  Exosomal proteins of epithelial cells
   119194263
  Exosomal proteins of breast milk
   119194263
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 MHC_I
Other DBs
NCBI-GeneID: 119194263
NCBI-ProteinID: XP_037304366
LinkDB
Position
8:3273051..3276932
AA seq 246 aa
MKSSTFLLLLCLSSCSAAHGHGYFMYADFRCNIHPAGPQRVEYLIDWYFNKEFMMQYNST
LGKWTGLTPAGLISASVFNENPFDVLQRKEEKQLICVDNVGHALNATRDNIAAPSVRLVE
ASGSGGDTTLVCSAYDFYPRHIQVAWLRDGQEVTSGVTSSEVLTNGNWTYLVHSYLRVTP
GGRDRVTCKVEHVSLKEPKLRTWAEHEARDSETGFLLGGACALLLGTACLSSGLMVHRRR
RYSNVL
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaagtcctccacgttcctgctgctcctgtgtctgtcctcctgctccgcggcccatgga
catggatacttcatgtatgccgacttccggtgcaacatacaccccgcggggccgcagcgg
gtggagtatctgatcgactggtatttcaacaaagagttcatgatgcagtacaacagcacg
ttggggaagtggaccggcctcaccccggccggactcatctccgcctccgtcttcaacgag
aacccgttcgacgtcctgcagcggaaggaggagaagcagctgatctgcgtggacaacgtg
gggcacgcgctgaacgccacgagggacaacatcgctgcacccagcgtccgtctggtggag
gccagcggctccggtggcgacaccacgctggtgtgcagcgcctacgacttctaccccaga
cacatccaggtggcgtggctccgcgacggacaggaagtgacctcgggcgtgacctccagc
gaggtgttgaccaacggaaactggacgtacttggtccactcctacctgagggtcacgccg
ggcgggcgggaccgggtcacctgcaaggtggagcacgtcagcctcaaggagcccaagctg
cgcacgtgggcggagcacgaggcccgagactcggagacgggcttcctgttgggcggcgct
tgtgctctgctgctggggacggcgtgtctgtcctcgggactgatggtgcacaggaggagg
agatattctaacgtcctgtga

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