Pungitius pungitius (ninespine stickleback): 119194792
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Entry
119194792 CDS
T07626
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug02010
ABC transporters
ppug04146
Peroxisome
ppug04977
Vitamin digestion and absorption
ppug04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119194792 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119194792 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
119194792 (abcd4)
04980 Cobalamin transport and metabolism
119194792 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119194792 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119194792 (abcd4)
Enzymes [BR:
ppug01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
119194792 (abcd4)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
119194792 (abcd4)
Transporters [BR:
ppug02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
119194792 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
FtsK_SpoIIIE
AAA_7
AAA_5
DUF87
NACHT
DUF6079_1st
nSTAND6
AAA_29
nSTAND1
ORC-CDC6-like
AAA_15
Motif
Other DBs
NCBI-GeneID:
119194792
NCBI-ProteinID:
XP_037305076
LinkDB
All DBs
Position
20:7172842..7180687
Genome browser
AA seq
615 aa
AA seq
DB search
MPRLEKANARRKKRPKLDWTFIQRFCSIQKVLFPSWTSQSALMFGTLLAVTLTEQLIIYQ
VGVLPSHFYSVLADKDYSGFQSLVGTAMVLILLNSTLKSIDQYICNQMYVSWRRTLTESL
HTSYFQGRVYYTLNVLREDIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLAYYSYHCF
YSTGWIGPVSIFGYFVIGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTDRRLQTLLQTQKSLINKELWLYIGVNTFDYLGGYLSYIIIAIPIFTGIYN
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILHKQC
DYDPASGESYDFDSDFNIHAGPADTAFVLDHLSYKSPYSDKLLVEDLSVKISEGTHLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYLTDGTLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGVASLLERTGGLDEKVDWNWYDVLSPGEMQRLCFARLFYL
QPKYAVLDEATSALTEEAEAQLYSTCKQLGMTLVSLGHRSSLVKYHDVQLKLCGGGLWEL
TKLKGGSRSLGEEAP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttggaaaaggcaaatgccagaaggaagaaaagacctaagttagactggacg
ttcattcagaggttctgcagcatccagaaggtcctgttcccatcatggaccagtcagagt
gctctgatgtttgggacgctgctcgcggtcactctcacagagcagctaatcatttaccaa
gtgggcgtcctccccagtcacttctacagcgtgctggcagacaaagactactcgggcttc
cagagtctggtgggcacggccatggtgctcatcttactcaactccacgttgaaaagtatc
gaccagtacatttgcaatcagatgtatgttagctggaggaggacgctaacggagagcctg
catacgtcctacttccagggccgagtctattacacactcaatgttctcagagaggatata
gacaatccagaccagcgcatcagtcaggatgcagagaggttgtgtaaacagatgagcacc
atggccagtcgtttgattgtatcaccgttcacgctggcttactactcctaccactgcttt
tatagcaccggctggatcggccctgtgagtatctttggctactttgtgattggcaccatc
gccaataaaatccttatggggcccattgtgtcgactctgtttgagcaagaaaaactggag
ggagacttcagattcaagcacatgcagatccgtgtcaatgcagagtctgcagctttttac
agagccggtaaagtggagcacatgaggaccgaccgcaggctgcagactctgttacaaact
cagaagagtctcatcaacaaagagctctggctttatatcggggtaaacacgttcgactac
ctcggaggttatctcagctacattataatcgccattcccatcttcaccggtatctataac
ggactcactcctggggagctcagtgcactcatcagtaagaacgcctttgtgtgcatctac
ctgataaatggcttcacgcagctgatagacctgtccaccaccctgtccgacgtggccgga
tacacccacaggatcggggagctgagggaggtgatggatgacatcctgcacaagcagtgc
gattatgacccggcatcgggcgaaagctacgactttgacagtgacttcaacatccacgcg
ggccccgcggacaccgccttcgtcctggaccatctttcgtacaaatctccttactcggac
aagctgctggtggaggatctgagtgtgaagatcagcgaggggacccatcttctggtggtg
ggtaacacgggcaccggcaagacgtcactgctgagggtcctcaaccgactctgggaggca
cacagcgggtttgtccaaatgaccacgtgcttcgggcccagaggaaccctcttcctgccc
cagaaaccttacctgactgacggcacgctgcgggagcaggtgatctacccgttgaaggat
atttaccctgcatcagggtcagtagacgatgacagaattatacaattcctggaattagcc
ggagtggccagtctcctggagcgcacaggcgggctggatgaaaaggtggactggaactgg
tatgatgttctgtctccaggtgaaatgcagcgtctctgctttgcgcgtctcttctacttg
cagcccaaatacgcagtgttggatgaggccaccagcgcgctgacggaggaggcagaagca
cagctgtactcgacctgtaaacagctgggcatgacgctggtcagcctgggacaccgcagc
agcctggtgaagtaccacgacgtccagttgaaactgtgtggcggaggcctgtgggagttg
accaagttaaaaggaggcagcaggagcctcggagaagaagcaccgtga
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