Pungitius pungitius (ninespine stickleback): 119194949
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Entry
119194949 CDS
T07626
Symbol
otofa
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119194949 (otofa)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119194949 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
119194949
NCBI-ProteinID:
XP_062415510
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All DBs
Position
20:complement(9742520..9792797)
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AA seq
2027 aa
AA seq
DB search
MMALMVHLKTAGHLRGKGDRMAKVTFRGLSFYSRVAENCEDVAHFNEMFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNTSIKTSVTIEIRYQ
SMDGSAGVWSDGEFLDVPDDRDGMFAFETESLLSGQSRGSGTSPGRSLQGSIPTFRKAGK
GVFSAMKLGKIRSSRDDHKRGDEPAVLDMDLDLDRKAMRLAGVVDPDTISLASVTAVTTN
VSNKRSKPDIKMEPSSGRPVDYQISITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKEST
NCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQF
YHKWAILSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDELEGNLLLPEGIPV
ERQWARFYVKIYRAEGLPKMNTNIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQKS
SYEPIWNEQVVFTELFPPLCKRMKVQIRDSDKVNDVAIGTHFVDLRKISNDGDKGFLPTL
GPAWANMYGSTRQYTLIDEHQDLNEGLGEGVSFRARLLLSVAVEILDTTSPELMSSTEVQ
VESVSNISESATGKIDEFFLFGSFLEATMIDRKIGDKAISFEITIGNYGNQIDGVSKPSS
RKKKKKDSENDEEEGELMQNSSDDEADEDVDLVSVSSTPPMKPVITDRNYFHLPYFEKKP
CVYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSLG
CSRFVTLANKDVNQAGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNIVKDKLKLVQN
FLQKLRFLADEPQHSIPDVFIWMMSNNKRVAYARVPSKDILYSIVDEETGKDCGKVKAVF
LKLPGKKGFGPAGWTVQSKLELYLWLGLNKQRKDFLCGLPNGFEEIKSAKMSHGLHSVPP
VSLVYNMKQVFQLRAHMYQARSLFAADNSGLSDPFARVFFSTHSQVTEILSETLCPTWDQ
LLVFDDVELFGEASELRDDPPIIVVEIFDQDTVGKAEFIGRTFAKPTIKMCDEHYGPPRF
PPQLEYYQIYRGNHAAGELLAAFELLQIGQGGRADLPPLEGPTDSERGPILPVPMGIRPI
LSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRGVQSVLIQNYKKNPNFSTLVKWFE
VDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVSSLRRFIYTTPDKASNNWATAAKLMN
GYMVLTNGGSQPRSSPSLSSRTFSRPAGDILVNMDAEHLVRKMDTVVKLDATSDAVVKVD
MTEEESDRDKKKKKKKKKGGVEEEEETDERMLDWWSKYFASIETLKETLRAQDAAQAEAE
EREDLEIAAEAADITHDDLLLKGSRAKEKSREKKSSKDRKKAADASDRRPVRAKVDELVV
YNKELESEYGNFEDWLHTFNLYRGKAGDDDEQALDDDRIVGRFKGSLCMYKLPVSEEITR
EAGFDPNMGMFQSIPHNDPIGVLVRVYVVRATDLHPADINGKADPYVVIKLGKSEVKDKE
NYISKQLNPVFGKSFDIEATFPMESMLTVSVYDWDLVGTDDLIGETKIDLENRFYSKYRA
TCGISSNYSVHGYNVWRDPLKPSQILAKLCKDGKIDGPHYGPGGRIKVANRVFQGPTEIE
DENGLKKQTEEHLALTVLTHWEEIPRVGCKLVPEHVETRPLLNPDKPGIEQGRIEMWVDM
FPMDMPAPGPAIDTAPRKPKRYELRVIIWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQ
EDRQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEEKIVISKKESMFSWDETEYKIPPRLTL
QVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSLAMIRNEQELPTISIFKQKRVKGWW
PFVARDENDEMELTGKVEAELHLVTAEEAEKSPVGLGRNEPDPLEKPNRPDTTFLWFLSP
LKAIRYLVCNRYKWLIIKMVLALLLLIMLGLFLYSMPGYLVKKLLGA
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctaatggttcacctgaagacagccggccacctgcgggggaaaggggacaga
atggccaaagttacattcagaggactgtccttctacagccgtgtggcagagaactgtgag
gacgtggcccacttcaatgagatgtttcggtggcccatcgccagcaggctggatggaaac
gagatgctggaaatccaagtgtacaattacagcaaagtattttccaacagactggtgggg
acgttctgcatggtgcttcagaaggtggccgaggagggacacctagagctgacggacacc
ctcatcgacgacaacaacacctcaatcaagaccagcgttaccatagagatcagataccag
tcgatggacggctcggcgggagtgtggagcgacggggagttcctcgacgtccccgatgac
cgcgacgggatgttcgccttcgaaacagagagcttgttgtcgggacagagccgcgggtcg
gggacgtctcctggacggtccttgcagggatccataccgaccttcaggaaagcagggaag
ggagtgttctcagccatgaagctcggcaagatcaggagctctagggacgatcacaagaga
ggagatgagccggcggtcctggacatggacctggacctggaccggaaggcgatgcgtctc
gctggagtcgtggacccagataccatctctctggcctcggttaccgccgtcaccaccaac
gtctccaataagaggtcaaagccagatattaagatggaaccgagctctggacgcccagtg
gactatcagatcagcattacagtgatcgaggcccgacagctgataggcctcaacatggac
cccgttgtgtgtgtggagatcggagatgacaaaaaatacacgtctatgaaggagtccacc
aactgcccgtactacaatgagtatttcgtctttgacttccacgtccctcctgacgtcatg
tttgataagatcatcaagctttcagtcattcattctaaaaatcttcttcgaagtgggaca
ttggtgggaaccttcaagatggatgtagggactgtttactctcagcctgaacaccagttt
taccacaaatgggccatcttgtctgaccctgatgacatcacagcggggtgtaaaggatac
gtgaagtgtgacatcgccgtggtggggaagggcgacaacatcaagaccccacacaaggcc
aacgagaccgacgaagacgaactagaggggaacctcctccttccagagggcatcccagta
gagaggcagtgggccaggttttacgtgaagatctaccgcgctgagggacttcctaaaatg
aacaccaacatcatggctaacgtgaagaaggccttcataggagagaaccgagacttggtg
gacccctacgtccaagtgcagtttgctgggcagaaagggaagacttcagtccagaagagc
agttatgaaccaatttggaacgagcaggtcgtcttcaccgagctgttccctccactctgc
aaacgcatgaaggtccagattcgagactcggataaggtcaacgatgttgccataggaacc
cattttgttgacctacgcaaaatatcaaatgatggtgataaagggttcctgcccaccttg
ggccccgcttgggccaacatgtacggttccacccgtcagtacactctgatagacgagcac
caggacctgaacgagggtctcggagaaggcgtgtctttcagagcccgtctcctgctctcc
gtcgccgtggagatcctcgacaccacttcccccgagctcatgagctccactgaagtgcag
gtggagagcgtctctaacatctccgagagcgccaccgggaaaatagatgagttcttcctc
tttggttccttcctggaggccaccatgatagataggaagattggtgacaaagcgatcagt
tttgaaatcacaataggtaactacggcaaccagatagacggtgtaagcaagccttcatcg
agaaagaaaaagaagaaagatagtgagaacgatgaagaggagggcgagctcatgcagaac
tccagtgacgacgaagcggatgaggacgtggacctggtttctgtctcctccactcctcca
atgaagcccgtcatcacggacaggaattatttccatcttccctactttgaaaagaagccg
tgtgtctacatcaaaagctggtggcaggaccaaagacgacgactttacaactccaacatg
atggacaagattgctgacaagctggaagagggtttgaatgatgtgcaggagatcattaag
acggagaaggcttttccagagcgcagactgcggggtgtgctggaagagctcagtctcggc
tgcagccggtttgtgactctggctaacaaggatgtgaaccaggcaggccggaccaaactg
gatcgagagcggctcaagtcgtgcatgagagagatggacagcatgggccagcaggccaag
cagatccgaactcaggtgaagaaaaacatagtcaaagacaagctgaagctggtgcagaac
ttcctgcagaagctccgtttcctagcagacgagcctcagcacagcatcccagatgttttc
atctggatgatgagcaacaacaagcgcgtggcctacgcccgggttccttccaaagacatc
ctctactccatagtggacgaggaaacgggaaaagactgcggcaaagtcaaagccgtcttc
ctcaagctgcctggtaaaaaggggtttggtcctgcaggctggacagttcagtccaagctg
gagttgtatctgtggctcggcctcaacaaacaaaggaaggactttctctgtggtctgcct
aatggtttcgaagagatcaaatctgctaaaatgagccacggccttcactccgtgcccccc
gttagccttgtctacaacatgaagcaggtgtttcagctcagagcacacatgtaccaggct
cgcagtctgtttgctgcggacaacagcggcctgtcggatcccttcgcccgagtcttcttc
tccacacacagccaggtcaccgagatcctgagcgagacgctttgcccgacgtgggaccag
ctgctggtgtttgacgatgtggagctcttcggagaggccagcgagctgagagatgaccct
ccgatcattgtagttgaaatctttgaccaggacaccgtgggcaaggcagagttcataggt
cgcacgtttgcgaagcccaccatcaagatgtgtgacgagcactacgggcccccgaggttc
ccgccccagctggagtactaccagatctacagagggaaccacgctgctggggaactgctg
gccgcgtttgagcttctgcagatcggtcaaggggggagggccgaccttcccccacttgaa
gggccgacggactctgagcgcggacccattctgccggtgccgatgggcatccgaccgatc
ctgagtcgctaccgcatagaggtcttgttctggggcttaagggacttgaagaggatcaac
ctggctcaggtggatcgccctcgtgtggacatagagtgcgcaggtcgaggtgtgcagtct
gtcctcatccagaactacaagaaaaacccaaacttcagcacgctggtcaaatggtttgaa
gtggaccttccagagaatgagctcctccaccctcctctcaacatccgggtggtggactgc
cgggcatttggccgttatatcctggttgggtcccacgctgtgagcagcctgagacgtttc
atctacaccaccccagacaaggcctccaacaactgggccactgcagctaagctaatgaat
ggctacatggtccttaccaatggcggctcccagcctcgctcctcacccagcctctcctcc
cgcaccttctctcgcccggcaggtgacatcctcgtcaacatggacgcggagcatctggtc
cgaaagatggacacggtggtcaagttggacgccacgtctgacgctgttgtaaaagttgac
atgaccgaggaggagagtgacagagacaaaaagaagaagaagaaaaagaagaagggagga
gtagaggaagaagaggagaccgatgagaggatgcttgactggtggtccaaatattttgct
tcgatagagacactgaaggagaccctcagagcccaggacgccgctcaggcagaggcggag
gagcgcgaggacctggagatagcagcagaggcagcagatatcacacacgacgaccttctt
ctcaaagggtccagggcaaaggaaaagagcagagagaagaaaagctccaaggacaggaag
aaggcagcggacgcctctgacaggcgacccgtccgagccaaagtggacgagctggtggtg
tacaacaaggagctggaaagtgagtatggaaactttgaagactggcttcacactttcaac
ctgtacagaggaaaagctggggacgacgacgaacaagctctggatgacgaccgcattgtt
ggcagattcaagggatccctatgtatgtacaagctacctgtgtccgaggaaatcacaagg
gaggcagggttcgatcctaatatgggcatgttccagagcatcccccacaacgatccgatc
ggcgtgcttgtccgtgtctacgtggtcagggcaacagatctccatcctgctgatatcaac
gggaaggccgatccatacgttgtcatcaagctgggcaagtcggaggtcaaggacaaagag
aactacatctccaaacagctcaatcccgtgtttggcaagtcgtttgacatcgaggccacg
ttccccatggagtccatgctaacggtgtccgtgtacgactgggacctggtcggcactgac
gacctgatcggagagacaaagatcgacttggagaatcgtttttacagcaaatacagagcc
acctgtggcatttcatccaactactctgtccatggatacaatgtttggcgtgacccattg
aagcccagtcagattttggcgaagctctgcaaggacggcaagatcgacggacctcattac
gggcccggaggccgaattaaagtggccaatcgagtattccagggacctacagagattgag
gatgaaaatggtctgaagaagcagacggaggagcatttggccctgacggtgctgacccac
tgggaggagatcccgagggtgggctgtaagctggtccctgaacacgtggagaccagaccc
ctgctgaacccggacaaacccggcatcgagcagggccgcattgagatgtgggtggatatg
tttccaatggacatgccggctccggggcctgcgattgacacggcaccgcggaaaccaaag
agatatgagctcagggtgattatttggaatacagacgaagtaatactggaggacgatgat
tacttcactggggaaaagtccagtgacatatttgtcaggggatggctaaaaggacagcag
gaggacaggcaggacacagatgtgcactatcactccctcactggtgagggcaacttcaac
tggcgcttcgtcttccccttcgattatctcatggctgaggagaagatcgtcatctccaag
aaggagtctatgttctcctgggatgagactgaatataagatccctcctcgcctcacgctg
caggtctgggacgccgaccacttctccgctgacgacttcctgggtgcgattgagctggac
ctgaaccggttccctcgtggggccaagacggccaagcagtgctccctcgccatgatccgg
aacgagcaggagctgcccacaatctccatcttcaaacaaaagagggtcaagggctggtgg
ccctttgtggcccgcgatgagaacgatgagatggagctcacgggtaaggttgaagctgag
cttcacctggtgactgcagaggaggcggagaaaagtcctgtagggcttggacgaaatgag
ccggatccactggagaaaccaaatcgcccggacactaccttcctgtggttcctgagccca
ctgaaagctatccgctacctggtgtgcaaccgctacaagtggctgatcatcaagatggtg
ctggccctgctgctgctcatcatgctgggcctcttcctctacagcatgccaggctacctt
gtcaagaagctgctcggggcctga
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integrated database retrieval system
