Pungitius pungitius (ninespine stickleback): 119196383
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Entry
119196383 CDS
T07626
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04260
Cardiac muscle contraction
ppug04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119196383
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119196383
04261 Adrenergic signaling in cardiomyocytes
119196383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119196383
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119196383
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
DUF2201
MCP-like_PDC_1
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
119196383
NCBI-ProteinID:
XP_037307924
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Position
6:13814184..13863120
Genome browser
AA seq
1083 aa
AA seq
DB search
MDTYRVGAWVFLVLLWQDGYLASEFPTQLMIKVWVEQMQKELVTLADSATPGQSLTQIFL
KNQHLYTVEQNDAEELVARAARKIEQLLRKRSAALEKLATAAEKLQMEHMWKDDFEGDEI
SYYNAKDNLDANETEGRKYRIRPDFKEDPSFKRLTDYNHTAVHIPTDIYDGSTIVLNELD
WSEALEEVFRKNREDDPTLLWQVYGSATGLARYYPASPWMDSRKTLSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKKTACF
EHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFEQLSTTNVSRANCNKIIMLFTDG
GEERAQAILEKYNAEKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQVQWTNVYLDALELGLVITGTLPVFNKTKTIDDRNGEHQNQL
ILGVMGIDVSLNDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLLPKNPKFQEPVTLDFL
DAELENDLKVETRRMMIDGETGERTIDTLVKTQDERYIDRGVRTYTFAPVNGTDYSLALA
LPRYSEHFIQAKLGDDLKRAMSSSWGQEAMETIQQERFDEFGYTYIAPREYCKELKLSPN
NTEFLLDFSQYIDSSTPDACNMSLVNRLILDAGLTAELVKLWNEQTVEGIVSRFVATDGG
ITRVYPRSAGEEWTENPETYESSFYKRTLDNKIYIFTAPSFSSEGREPVAESGILVSKAV
ELTIDEVTIKPAVVGVKLNVSFWMSIFMNATLKLNCKDEICGCLRNDKHVDCVILDDGGF
LLMSNHDEYITLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSICDPEKDGKAAAGPRS
VYVPTIADMLSIGWWASSAAWSILQQLFFGLVFPNLLEAAESAEDDIPDAMFKESCITEQ
TQYFFDNNETSYSGVLDCGNCSRMYRAEKLPKTNLVFLIADAKATCLSCDPRPLRQAEQP
SEGPDPCELAQNPRYRKGPDVCFDNNEDEDDSDCGGGTSLSMCLWPMLGLQLLLWVITAL
QNS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacagggttggagcctgggtgttcctggtcctgttgtggcaggacggctat
ttggcatcggagttcccgacacagctcatgataaaggtatgggttgaacagatgcagaaa
gagcttgtgaccctggcagactcggctacacctggacaaagcctcactcagatttttcta
aaaaaccaacacctgtacactgtggagcaaaatgacgcagaggagcttgtggcaagagca
gcccggaaaattgaacagctgctgcggaagaggtctgctgccttggagaaattggccaca
gctgcggagaagctacagatggagcatatgtggaaagacgactttgagggtgatgaaatc
tcttactacaacgcaaaggacaatctggatgcaaatgagacggagggaagaaaatatagg
atccggccggattttaaagaggatccatcgtttaaacgtttgactgactacaaccacacg
gctgtccacatccccactgacatctatgatggctccaccattgtgctaaatgaactggac
tggtcggaggcattagaggaggtgtttagaaagaacagagaggacgacccgactctgctc
tggcaggtgtatggcagcgctacggggctagctcgctactatccagcttctccctggatg
gattctcgcaagaccctgagtaaaattgatctttatgatgtccgcaggaggccatggtac
attcaaggagctgcctcacctaaagatatgctaatccttgtggatgcaagcgggagtgtg
tctggcttgactctcaagctgatcaggacctccgtcagtgagatgttggagactctgtct
gacgacgactacgtcaatgtagtttattttaacaccagggtgaagaagacggcgtgtttc
gaacatctggtccaagccaacgtgaggaacaagaaactgctgaaggatgccgttcagaac
atcacagctaaaggaattactaactacacaaaaggttttgagtttgcttttgagcagctc
tctacgactaatgtgagtagagcaaactgcaacaagattattatgctgtttactgacgga
ggagaagaaagagctcaggccatattagagaagtacaatgctgagaaaaaggtgaggatc
ttcaccttctcagtaggacagcacaactatgataaagggccgattcagtggatggcctgc
tccaacaaaggttacttctatgagattccttccatcggggctatcagaataaacacacag
gagtacctagatgtcctgggaagaccaatggttttggcagacaagcaggccaaacaagtc
caatggactaatgtatacctcgatgctctggaacttggtctggtcattactggaacatta
cctgtcttcaataagacaaagaccatagatgacaggaatggcgagcaccagaatcaattg
attcttggcgttatgggaattgacgtgtctctgaatgacatcaagaagctcacgccacgc
ttcacaattggtccaaatgggtactattttgccattgatcctaatggatatgtcctgctt
caccccaatcttctgccaaagaatcctaaattccaggaacctgttaccctcgacttccta
gacgcagagctggaaaatgacctcaaagtggagaccaggagaatgatgattgacggggag
acgggcgaacggaccattgacacactggtgaaaactcaggatgagaggtacatagaccga
ggagtcaggacctacacgtttgcgccggtcaatgggacagattacagcctggctctggct
ctaccgagatacagtgaacacttcattcaagccaaactgggagatgacctgaaaagagcc
atgtcttcttcttggggccaagaagccatggaaaccatacaacaggagaggtttgatgag
tttggttacacctacattgctccaagggagtactgcaaggagctgaagttgtcacccaac
aacacagagttcctcctcgactttagtcagtacattgatagcagcactccagatgcatgt
aatatgtccctggtgaatcgactaattctggatgcaggcctgacagctgaactggttaaa
ctttggaacgagcagacagtggaaggaatagtgtccagatttgttgccacagatggagga
ataacaagagtctacccgagaagtgctggggaagaatggactgagaatcctgagacatat
gagtccagcttctacaaaaggaccctggacaataaaatttatattttcacagctccatct
ttcagctcagaaggcagggagcccgtcgctgagtcgggtattctagtcagcaaagcagtg
gaactcacaattgacgaagtcacgatcaaaccagctgtagtgggagtgaaactcaatgtc
tccttctggatgagcattttcatgaatgctacactgaagctgaattgtaaagatgagatt
tgtggctgtctgaggaatgacaagcatgtagactgtgtcatcttggatgatgggggattt
cttctcatgtcaaaccacgatgagtacatcacactgataggtcagttctttggcgaggtg
gatcctgtgctgatgatcaaccttgtgaacacctccctgtactcgttcaacaagacctat
gactaccagtccatctgtgatccagagaaagacggcaaggcagcagcaggaccccgctcc
gtctacgtgcccaccattgccgacatgctgagtattggctggtgggcctccagtgctgcc
tggtctatactacagcagctcttctttgggcttgtgttccccaaccttctggaggcagcg
gagtcagcggaagatgacataccggacgccatgtttaaggaaagctgcatcacagagcag
actcagtacttctttgacaacaatgaaacgtcctactcaggcgtcctcgactgtggaaac
tgttccaggatgtatcgtgctgagaagttgccaaagaccaacctagtgttcctgatcgcc
gacgccaaggcaacgtgtttgtcttgtgacccgaggccactacggcaggcggaacagccc
tctgaaggtccagatccatgtgagcttgctcaaaatcccagataccgcaaagggccggat
gtatgtttcgacaacaatgaagatgaagatgattctgactgtggcggagggaccagccta
agcatgtgtctttggccgatgcttggactccaactactgctgtgggtcatcacagcttta
cagaactcatga
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