Pungitius pungitius (ninespine stickleback): 119197022
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Entry
119197022 CDS
T07626
Symbol
arhgef1b
Name
(RefSeq) rho guanine nucleotide exchange factor 1b
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04270
Vascular smooth muscle contraction
ppug04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119197022 (arhgef1b)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119197022 (arhgef1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119197022 (arhgef1b)
Membrane trafficking [BR:
ppug04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119197022 (arhgef1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
Motif
Other DBs
NCBI-GeneID:
119197022
NCBI-ProteinID:
XP_062421358
LinkDB
All DBs
Position
11:20179900..20202124
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AA seq
1063 aa
AA seq
DB search
MSIIGAEDEDFENDLNEVTEYQCKHFEDIHLLKTRPTHLLVFIQHVILQFDPAPLLCYLH
AELFRNLSAKETKKQVVEFYSTFLDKGAVISSCPPPVPRPSDRLRADPFHDDNQRRFAQE
VQAVLAPEVAKQLEDFRQKRMMGMTPNERELIDVENHYPTDRVPLEMKEKSVAENLMDLI
FENHSTIASEEDKCHSIYTSVATYMKHLGVKSKTLDSRKSKASFFTRKQQKTKKEESTKL
KSRLGFGVPSWIAGNPDVKPKTEAEAEKEKVNPERKGSALGRGSLTDPAAPFPNCRKSVS
TPGLEISDGSGSSSSSSSAAAAAIGAAAIGPESSHVDVVSNNRLEPPALCDGGDVSPVSL
GGGLTIGEPLSPMDTPTEENVEKDRRKTSRKVMRSESARAQPSRRRGSSRAKQSRSRSDV
DLQPPPATATTGAPLSPQHLRPLETVVLPPEGLGPSPTSTSAQLEEMEPRLLEFEADSPN
WRELAPPDELSRLSKKETKRQEVINELFATEHAHVRMLSVLQMIFFRPLEREELLTSQEV
SAIFPNLDELIEMHYNFYENLKKLRLENNFIVKSISTTVLNRFGGTEGEWFQKLTARFCS
HQSWALDQIKSRQKKDPRFNSFILDAESKPQCRRLQLKDIIPTEMQRLTKYPLLLENIAK
STEDPTEKERIQQSAECCKRILNHVNEEVKEMENLLILKEYQRKLDTSGLKPSTTLYADY
KNIDLTWRKMLFEGPVIWRVTKEKAIEVQCVLLRDLLVLLQKQDDKMVLKCHSKSNMAVQ
EGKQMLSPIIKLDSVFLRDVATDQKAFYVIFTWDSGAQIYELVAQTLGEKKLWTEVIKSA
VDDLKKGGGLRLTLPPGSGGVLSPTMLTAPLSPSENGGLKSSGDPDKDLMTDDKSSDPRH
MLIDFLSDKGFDLIGHSNSDRDNVASSALDEVMSLKRLVVGSISLSDDSQQAQKPGQEMD
PCQSTEENQTMATAAVKEEEEDEEEKKEKEKDNSCEVEGAETKAEEERSISAPLVLSQER
MQEVCRRLLSLEEKVKSLQTVEEEHHRLQEALSKFSLEGGNFQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggggcggaggatgaggactttgagaacgacctcaacgaggtaacggag
taccagtgcaaacactttgaggatatacacctgttaaagacccggccaacccacctgctg
gtcttcattcaacatgtcatcctacagtttgacccggctccgctgctgtgctacctgcat
gcggagctcttcaggaacctcagtgccaaagagaccaagaagcaagtggtggagttctac
agcactttcctggacaaaggggcagtaatctcctcttgtcccccccccgtcccccgtccc
tcagaccgactgcgtgcagatccgttccacgatgacaaccagaggcgttttgctcaggag
gttcaggccgtgctggcgcctgaggtggccaaacagctggaggacttcaggcagaagagg
atgatgggtatgacccccaacgagagggagctcatcgacgtggaaaaccactaccccacc
gaccgcgtccccttggagatgaaggagaagtctgtggccgagaacctgatggacctgata
tttgagaaccactctacaattgcgtctgaagaggacaaatgccattccatctatacatcg
gtggccacttacatgaagcaccttggggttaaatccaagacacttgacagcaggaagtcc
aaagcgagcttcttcacgagaaagcagcagaagactaagaaggaggaatccacaaagctc
aagtccaggttgggcttcggggtccccagctggatcgcaggaaaccctgacgtcaaacct
aaaacggaggctgaagcggagaaggagaaggtgaacccggagcgtaagggctcggccctc
ggccgcggctccctgaccgacccggcagccccgttccccaactgcaggaagtccgtctcc
acgccggggctcgagatcagcgacggctcgggcagcagcagcagcagcagcagcgccgcc
gccgccgccatcggcgccgccgccatcggcccggagtcgtcacacgtggacgtcgtctcc
aacaaccgcctggagcccccggccctgtgcgacgggggggacgtgtcccccgtcagtttg
ggaggagggcttactatcggggagcccctctcccccatggacacccccacggaggagaat
gtggagaaagatagacggaagacaagcaggaaagtgatgcgtagcgagagcgcccgcgcc
cagccctcccgccgccgcggctcttctcgagccaaacagtctcgctcccgtagcgacgtg
gacctgcagccgcctcccgccacggcaacaacgggcgcaccgctcagcccccagcacctc
cgtcccctagagacagtagttctaccgcccgaggggcttggcccctccccgaccagcacc
tccgcccagctggaggagatggagcctcgcctgctggagtttgaggcggactcgcccaac
tggagggagctggccccccccgacgaactgtccaggctcagcaagaaggagaccaagagg
caggaggtcatcaacgagctgttcgccacggagcacgcccacgtgcgcatgctgagtgtc
ctgcagatgatcttcttcaggcctttggagagggaggagctgctgaccagccaggaggtg
tcggccatcttcccgaacctcgacgagctcattgagatgcattacaacttctacgagaac
ctgaagaaactgcgtttggagaacaacttcattgtcaaatctatcagcaccacggtgctc
aacagatttgggggtacagaaggcgagtggttccagaaattgacggctcggttctgcagt
caccagtcctgggccttggaccagatcaagagccggcagaagaaagatccacgcttcaac
tccttcatactggatgcagagagtaagccgcaatgccgcaggctgcagctcaaggacatc
attcccaccgagatgcagaggctgaccaaatacccgctgctgctggagaacatcgccaag
agcacagaggacccgacggagaaggagaggatccagcagagcgccgagtgctgcaagagg
atcctcaaccatgtcaacgaagaggtcaaggagatggagaacctactgattctgaaggaa
taccagcgcaaactggacacatccggcctcaaaccgagcactaccctctatgcagattat
aagaacatcgacctgacttggaggaagatgctctttgaaggccctgtgatctggagagtc
accaaggagaaagcaatcgaggtgcagtgcgtgctgctcagggacctgctggtgctcctc
cagaagcaggacgacaagatggtgctgaagtgccacagcaagagcaacatggccgtgcag
gagggcaagcagatgctgagccccatcatcaagctcgactccgtcttcctccgcgacgtg
gccacagatcagaaggccttctatgtcatctttacctgggacagcggggcgcagatctac
gagttggtggctcaaactctcggggaaaagaaactctggaccgaggtgataaagtcagcg
gtggacgatctgaagaagggaggaggcctcaggttgacgctgcctcctggaagtggagga
gttctcagccccaccatgctgacggcccctttgagcccgagtgagaacggcggtttgaag
agcagcggcgatccagacaaggacctcatgaccgacgacaagtcttcagacccccgccac
atgctgattgatttcctgtcggacaaaggcttcgacctgattggccactccaacagcgac
cgggacaacgtggccagcagcgctctggacgaagtcatgtccctgaagaggctggtggtc
ggcagcatcagcctatcagacgactcgcagcaggcgcagaagcccggtcaggaaatggat
ccctgtcaatcgacagaagaaaaccagaccatggccacggcagcagtgaaggaggaagag
gaggatgaggaggagaagaaggagaaggagaaggacaactcctgtgaagtagaaggtgcg
gagacgaaggcggaggaggagaggagcatcagcgcgcccctcgtgctgtcccaggagagg
atgcaggaggtgtgcaggaggctcctcagtctggaggaaaaagtaaagagcttacagact
gtggaagaggagcaccacaggctgcaggaggccctctccaagttctccctggaggggggc
aacttccagtga
DBGET
integrated database retrieval system
