Pungitius pungitius (ninespine stickleback): 119197217
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Entry
119197217 CDS
T07626
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119197217 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119197217 (phc1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
119197217 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
SPAN-X
Motif
Other DBs
NCBI-GeneID:
119197217
NCBI-ProteinID:
XP_037309240
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Position
11:complement(13967815..13973386)
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AA seq
782 aa
AA seq
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MDAGEDQNTGTTNGPPQTSGNSRAPQIAHMSLYERQAVQALQALQRQPHAAQYFHQLMLQ
QQINSAQLHNLAAVQQAATLAASRQSNTPSSTQATTTVSFVVNLSTTSAGGAMNNPRPHG
PASSAATTALNQSVLLGGNSAGQGQMYLRVNRSLRAPLAPQLIFMPGGTATVATVAQAQP
QQQQQQHEVTPTTAGVQSDNDQVQNLALHCTATPRAVAVKSEIPERKDVAGFPLGQQQQT
FTQTAQQQQVLPQQQQQMAKPTFAQQSSANAMTLKTSTPAASIAPSSTSSQALPLSQLLL
SSSSAPVILVPTSNVTTTTQGYSIGAVTQKANGNTQTLVVQPLQQAGTATEKGPVPIQPK
TAQGHRLPVQLPPRHPPHILPAPPSNSQHNSPHIPVQLVGARQGLNTHAVALAQARSGMA
QEGSAGGNVNTVSNNSAMHQIKPAIGSLKRKSDCDAPNETATDSPDCAPMKDSAPPLSPA
PTKDSAPPVVAAFSSPPTLLLPLPLSRVGHGDKDRAPVPQAVVKPQVLTHLIEGFVIQEG
AEPFPVAGLLKDRDFALVGRSENGPPLLKCEYCGSLAPASQFRGSKRFCSNTCAKRYNVS
CSQHFKTSRGRSGAGPPPPPPPTNEGAARRRGPSRRSSSNITCNKVSGRNLPVKSHSESS
RSEDVSSDVEEEDDSPSLSPSSSHSRSRAELSAPPSDSVAPGSLPLDGADFLSATPAQWS
VEEVCRFISSLQGCEELAAHFLSQEIDGQALMLLREDHLISTMNIKLGPALKICASINTL
RE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgaagaccaaaacacaggaacaaccaatggacctcctcagacgagtggg
aactctcgtgcaccccagatagcccacatgtccctttatgagagacaggcggtacaggct
ctacaagcactgcagcgacagccacatgcagctcagtacttccaccagctgatgctgcag
cagcagatcaacagtgcccaactccacaatttggccgccgtgcaacaggctgctacactt
gcagccagtcgacagtccaataccccgagtagcacccaggcaaccaccactgtaagtttt
gttgtcaacctaagcaccacatctgcaggaggtgccatgaacaatccacgtccccacggt
ccagcctcctccgcagcgacaacggctctcaaccagtcagtgctgctcgggggaaactcg
gcaggacagggacagatgtaccttagggttaaccgctctcttagggccccccttgcccct
cagctcattttcatgcctggtggtacagcgacggtagcaacagttgcccaggcgcagccc
cagcagcaacagcaacagcacgaagtcacccctaccactgccggtgttcagtctgacaat
gatcaggtacagaatctggccctccattgcactgccactcccagagcggttgcggtcaag
tctgagattccagagaggaaagatgttgccggctttcctctcggccaacagcagcagacc
ttcacccagacagctcagcagcagcaagtgctcccacagcagcagcaacagatggccaaa
cccacctttgctcagcagtcctcggccaacgctatgacattaaagactagcacgcccgct
gcctcaatagctccttcctccacctcttctcaagcactccctctgtcccaactcctcctg
tcctcctcctctgcccctgtgatcctggtacccacctcaaacgttacaaccaccacccag
ggctactccatcggcgcggtgacccagaaagcaaacgggaacacgcagaccctggtggtg
cagcccttgcaacaggccggcacggctacagaaaagggacccgtgccgatccagcccaag
acggctcagggacaccgcttgcccgtgcagctgcctcctcgacacccacctcacattctg
cccgcgccacctagcaacagccagcacaacagtccccacatccctgtgcagctggtggga
gcgaggcagggattaaacacccatgcggtggctctggctcaggcacgtagcggcatggcc
caggaaggttcagctggcgggaatgttaacaccgtctccaacaacagtgccatgcatcag
atcaagcctgccattggctctctgaagagaaaatctgactgcgatgctccaaatgagacg
gccacagattctccagactgtgcgcccatgaaagattctgctcctcccttatctcctgcc
cccaccaaggactcagctcctccggtcgtagctgccttctcgtctccgcccacacttctg
ttgcctctgcccctgtcgagagtcgggcacggggacaaagacagagcgcccgttccgcag
gcagtggtcaaacctcaagtgctcacccacctcatagagggctttgtcatccaggaggga
gctgagcctttccccgttgccggactcctcaaagacagagattttgcccttgttggccgc
tcagagaatggacctccattgttgaaatgcgagtattgtggaagcctcgccccagccagc
cagttcagaggatcaaagaggttctgttcaaatacttgtgcaaagaggtacaatgtgagc
tgcagccaacacttcaagaccagcagagggaggagtggtgccggaccgccgccgccgcct
ccacccaccaatgagggcgctgctaggcgaagagggccctctcgcaggagcagttccaac
atcacatgtaataaagtatcgggcaggaatctccctgttaagagtcactctgagtccagc
cgctcggaggacgtctccagcgacgtggaagaagaggacgactctccctccctgtccccg
agctcctcacactcccgctctcgagcagagctcagcgctcctccgtctgacagcgtagct
cctggcagcctccctctagatggggctgacttcctctcagcaaccccggcccagtggagt
gtggaggaagtctgccggtttatctcgtctcttcaaggctgtgaagagttggcggcccac
tttctgtcacaggaaatagacggacaggctctgatgctcctgcgagaggaccatctcatc
tccacgatgaatatcaaactgggtcctgccctaaagatctgtgcctccatcaacacgctg
cgtgagtga
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