Pungitius pungitius (ninespine stickleback): 119197935
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Entry
119197935 CDS
T07626
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119197935 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ppug04052
]
119197935 (bdnf)
Cytokines and neuropeptides [BR:
ppug04052
]
Cytokines
Growth factors (RTK binding)
119197935 (bdnf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
119197935
NCBI-ProteinID:
XP_037310559
LinkDB
All DBs
Position
4:complement(11006524..11021741)
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AA seq
299 aa
AA seq
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MSAEADVDIAPVERQIVWHFFGCGYASTVREFHQVRRVMTILFLTMVISYFSCMRAAPLR
DAPGMRGHRTEGYLGAAATATRGHGTPQSGGGPGQRGELPSLTDTFEQVIEELLEVEGAD
AIQGGGGPSSLVTAETKDVDLYDSRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRR
HSDPSRRGELSVCDSISQWVTAVDKKTAIDMSGQTVTVMEKVPVPNGQLKQYFYETKCNP
MGYTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaggctgatgttgacatagcccctgtggaaagacagattgtgtggcatttc
tttggctgtggatatgccagtacagtgagagagttccaccaggttagaagagtgatgacc
atcctgttccttactatggttatttcatacttcagttgcatgagagctgcgcccctgaga
gacgccccgggcatgcggggccaccggacggaaggctacttgggcgccgcggcgacagcc
acgcggggccacgggactccgcagagtggcggtgggccaggccagcgcggggaactgccc
tcactcacagacacctttgagcaggtgatagaggagctgctggaggtggagggggctgat
gcgatccagggaggtgggggcccgtcttctttggtcaccgcagagaccaaggatgtcgac
ctgtacgactcgcgggtgatgatcagcaaccaagtgcctttggagccgccgttgctcttt
cttctggaggaatacaaaaactatctggatgccgctaacatgtccatgagggtgcggcga
cactccgatccctcgcggcgcggagagctcagtgtgtgtgacagtattagccagtgggtg
acagctgtggataaaaagacggcaatagacatgtctgggcagacagttaccgtcatggaa
aaggtccctgtccccaatggccaactgaagcaatacttttatgagaccaaatgcaacccc
atggggtacacaaaggaaggctgcagaggaatagacaagaggcattataattcccaatgc
aggacaacccagtcctacgtgcgagcgcttaccatggatagcaaaaagaagattggctgg
cggtttataaggatagacacttcatgtgtatgcacattgaccattaaaagagggagatag
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