Pungitius pungitius (ninespine stickleback): 119199024
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Entry
119199024 CDS
T07626
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119199024 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ppug04050
]
119199024 (tnfrsf11a)
04090 CD molecules [BR:
ppug04090
]
119199024 (tnfrsf11a)
Cytokine receptors [BR:
ppug04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119199024 (tnfrsf11a)
CD molecules [BR:
ppug04090
]
Proteins
119199024 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
119199024
NCBI-ProteinID:
XP_037312586
LinkDB
All DBs
Position
19:complement(8912273..8924578)
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AA seq
669 aa
AA seq
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MRSKSSTRWIVRVWITCVLVAFYAQDAVSKSCNETQYSPENKPSRCCDKCKPGSRVSLDC
TNSKSTTCVSCNVDEYQPGWTEDTHCIKQKYCDQGKYFMPRRKNLVAEEPCRCKKDYQCH
PINCEFCEKIPTCDIGFGLEVDPESTIGRKICVACKKGFFSDENSEEQCKRWTNCKAKER
TETQPGSAEADAVCGPPVSGAAPSWLIVSVLSVITVLSLLILLLFCYKDKLKLLSVNLRS
CVQNLKRTRIQQETLAPLYHSGAGGGLVGCPKYTPCDTTKLIYQAPHCPADGQPCTFPIS
VPDVKVSLPLTGERTEEEGTKGKSAMENRSEGPGEPEEVSEEDEVVSVSPLLAGSCICLI
PIREPLEVGENEDCSQAVSCGTPGTCSCRGPDGEREADESGREENSGSARADSNGGNGDG
NLGKIILTKRETGVASLAQLSPPLLHISSVVPQPSTLPELCLPLSQAQTRSDFKPHLTDR
PLVKREESYRLASADPPATESSAPSAMISVSPLMTSSSVGDLHLEKPPEASSPELGQGLC
WERSKGLKLSSGELDLECSPESLHSQLTEPTLTSGQVSGSHNTTFISSGQVMNFTGEVIV
VYVGQSSLGSDGAGQGDAFGSPVQEESSETAPFLPSSTGPRREASVSRGAVRDETLPVQE
AMEERPTGK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgaagagttctacacgttggatagtccgagtctggataacgtgcgtcctcgtc
gccttttacgcgcaggatgctgtctccaaatcttgtaatgaaacacaatattctccagaa
aataaaccctccagatgctgcgacaagtgtaaaccaggctcccgtgtgtctttggactgc
accaactccaaatccactacatgtgttagttgtaatgtggatgaataccagcctggctgg
actgaagacacgcactgtattaagcagaagtactgtgaccaaggtaagtattttatgccg
aggagaaaaaaccttgtggcagaggagccgtgtcgctgcaaaaaggactatcaatgccac
cccatcaactgcgagttctgtgagaagatacccacctgcgacatcggattcggactcgag
gtggaccccgagtccaccattgggaggaagatatgtgttgcgtgtaagaaaggcttcttc
tctgatgaaaatagcgaggaacaatgcaaacgatggactaattgtaaagccaaggaaagg
actgaaacacagccgggcagcgctgaggcggacgcagtgtgtggaccacctgtctctggt
gcagcaccctcctggcttattgtctccgtgctgtcagtcatcacggttctctctctcctc
atcctgctcctcttctgctacaaggacaagctgaaattattgtctgtaaatctgcgatcc
tgtgtccagaatctgaagaggacgaggatacaacaggagactttggcccctctttaccac
agtggagctggaggaggattagtagggtgccccaaatatacaccgtgtgatacgaccaaa
ctcatctaccaagccccccactgccccgccgacgggcagccttgcacctttcccatatcc
gttcccgatgtcaaggtctcgctgcccttaacaggggaaaggacggaggaagaaggcacc
aaggggaagtcagcgatggagaatcggagcgaagggcctggagaacctgaggaagtgtca
gaagaagacgaggttgtcagtgtgtctcctcttttggctggttcttgcatttgtctcatt
cctatccgcgaacccctggaagtaggggagaacgaggactgtagccaggccgtcagctgc
gggactccaggaacctgctcgtgtagagggccggatggagaaagggaggctgatgagagc
gggagagaggagaatagtgggagtgcgagggcagacagcaacggaggaaacggagatgga
aatctaggaaagatcattttgaccaagagggaaaccggtgttgcatcactcgcacagctt
tctcctccactcctccacatctcctccgtcgtacctcaacccagtacacttcctgaactc
tgcctgccgctgtctcaagctcagacgaggtcagatttcaaacctcacctgactgacagg
ccactggtgaagcgggaggaatcatacagactggcaagcgcagacccccccgccacagag
agcagtgccccctccgcgatgatctccgtcagccccttgatgacttcctcgtctgttgga
gatctccacctggagaagccccctgaggcctcgagcccggagctcggccaaggactctgc
tgggagcgtagcaagggattaaaactctcttctggagagttagatcttgagtgttcacct
gagagcctccatagtcagctgactgaaccaactcttacctcaggtcaggtgtccgggagc
cacaacaccaccttcatctccagcggccaggtgatgaacttcaccggcgaggtcatcgtg
gtgtacgtcggccagtcgtctctggggagtgacggggccggtcagggcgacgccttcggg
agccccgtccaggaggagtccagtgagacggccccgtttttgccgagcagcacggggccg
cggcgcgaggcctccgttagtcggggcgccgtgcgagacgagacgctgcccgtccaggag
gcgatggaggagcgtccgacggggaagtga
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