Pungitius pungitius (ninespine stickleback): 119209376
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Entry
119209376 CDS
T07626
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119209376 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119209376 (pbx1a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119209376 (pbx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
Peptidase_C97
GAIN
Motif
Other DBs
NCBI-GeneID:
119209376
NCBI-ProteinID:
XP_037314567
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All DBs
Position
15:12432677..12474951
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AA seq
448 aa
AA seq
DB search
MMDEQPRLMHSHGVGMAGHPGLAQHMQDGTAGTDGEGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGVAGPE
KGGGSAAAAAAAAATGGIGADNSVEHTDYRAKLSQIRQIYHTELEKYEQLDIVPTGGGYG
QRQNFKKNACNEFTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEA
VMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSN
WFGNKRIRYKKNIGKFQEEANMYAARTAVSATSVSAHGSQANSPSTPNSAGSAGSFNMSN
SGDLFMSVQSLNGDSYQGGQVGANIQSQVDTLRHVISQTGGYSDSLAASQMYSPQGINTN
GGWQDAPTPSSVTSPTEGPGSVHSDTSN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgagcagccgcggttgatgcactcccacggggtgggcatggccggacacccc
ggcctggcgcagcacatgcaggatggcacggcggggacggacggagagggacgaaagcag
gacatcggagacatattacagcaaataatgaccatcacagaccaaagcttagacgaagca
caggcgaggaaacatgcactgaactgccacagaatgaaacctgctctcttcaacgtcttg
tgtgaaataaaagagaaaacagtgctcagtatccgaggcgcccaggaggaggagcccccg
gaccctcagctgatgcgactagacaacatgctgctggcggagggcgtggccgggcccgag
aaaggcggcgggtcggcagctgcggcggccgcggcggcggccactggcggcatcggcgcc
gacaactcagtagagcacaccgactaccgggccaagctgtctcagatccgacaaatttac
cacacagagctggagaagtacgagcagttggacatcgtcccgactggtggtggatatgga
cagaggcaaaactttaaaaaaaatgcgtgcaatgagttcaccacccatgtgatgaacctg
ctgagggagcagtctcgcacacgacccatctcgcccaaagagattgagcgcatggtcagc
atcatccaccgcaagttcagctccatccagatgcagctgaaacagagcacctgcgaggcc
gtcatgatcctgcgctcacgcttcctcgacgccaggcgaaagaggaggaacttcaacaaa
caggcgacagagatcctgaacgagtacttttactcccacctcagtaacccctatcccagc
gaggaggccaaagaagagctggctaagaaatgcagcatcacagtgtcacaggtatcaaac
tggtttggaaacaagagaatccggtacaagaaaaacatcggcaagttccaagaagaagcc
aacatgtacgcggcgaggaccgcggtcagcgcgaccagtgtgtccgctcacggcagccag
gccaactccccgtcgactcccaattcagcaggttctgccggctcttttaacatgtcaaac
tccggagacttgttcatgagtgtgcagtccctcaatggggactcgtaccaaggggggcag
gttggggccaacatacaatcccaggtggatacccttcgccatgttatcagccagaccgga
ggatacagtgacagcctcgcagccagccagatgtacagtccacagggcatcaacacaaac
ggcggctggcaagatgctccgactccttcgtcagtgacatcgcccacagaaggaccggga
agcgttcattcggatacttccaactga
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