Pungitius pungitius (ninespine stickleback): 119210552
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Entry
119210552 CDS
T07626
Symbol
ptcd3
Name
(RefSeq) small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119210552 (ptcd3)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
119210552 (ptcd3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
PPR
TPR_24
PPR_1
RPM2
Motif
Other DBs
NCBI-GeneID:
119210552
NCBI-ProteinID:
XP_037316589
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All DBs
Position
2:complement(27660905..27668686)
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AA seq
678 aa
AA seq
DB search
MVYSSQKPPVRNNMAAPTRHVGHFIPKNIQFLRNNFEQFWSHRSFGWTPALRQQAAEANT
DSFVIPRKKTWRKEAVLETLASTVGRDPTAHPYLFQDDPYLSPRTSNEFRMYSLSQESGR
SAAKYFVDCNPKFFTKDFAEPHIPCLMPETVSLLLDEMSEEALKERISLRKVTAAVDMYD
QLIQAGTAVSMQTAHELLDLICLYCDKDPVQGGPQAEDTEEPGEELKKRKGRFRRPSDVL
RSTWRENNNAERIFNLLPERDTRCYSALIRGMVKHGAYAKAFSVYTDMLNNRVTADVHIF
NALLLATPEVRDKYKERWDLITELLNQMKEQKVQPNLLTFNSVLKALRRCGFLAKTQALC
TLNEMKAVGIAPSLASFDHILAVFFRAANTGESNTDVLQEVMSELAGSSLSCQDPDDVLF
FSSAMRLCMDNKDLELGYKVQSLVEQGENWRLLGDTHQQTVFYGRFFNLLCMMEHIDVVL
KWYRRLVPSLYYPNHHGLRDLLQALDTDGRLDLLPTIWKDIRSLGHDNKPDLVEEVLTLM
ARDTHSPEVQEAFALCALDVKSVFGADRGRQSLEWSNASLSHITSLLLRANKTQQAWEML
QLFKSENRVPNEGLLKDFLSACRSHGSPSRAVELVQLSAAFCLSATPKLAKQALAEFDVT
EEQRAVLSELEATGEVSD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggtttattcctcccagaagcccccagtccgtaacaacatggcggcgcccacacggcac
gtagggcattttatccctaagaacatccaatttttgcgaaataattttgagcagttctgg
agtcacaggagttttggttggactccagctttgcgacagcaagccgcagaagccaacaca
gatagttttgtcatccccaggaagaaaacatggcgcaaggaggcagtgctggagaccctg
gcttcgactgtcggccgcgatcctacagcacatccctacctcttccaggatgacccgtac
ctctctcccaggacctccaatgagtttaggatgtactctctctctcaggagtctggaaga
tccgctgcaaaatactttgtcgactgcaaccccaagttcttcaccaaagactttgctgaa
ccacacataccatgtctgatgccggagactgtgtcactgctacttgatgagatgagtgag
gaggcactgaaggaacgaatcagcttgaggaaagttacagctgctgtcgacatgtatgat
caactgatccaagctggcacagcggtctctatgcaaacagcccatgaactgttggacctg
atctgtctctactgtgacaaagaccctgtccagggtgggccgcaggcagaagacacggag
gagccgggagaggagctgaagaaaaggaaggggaggttccgtcggccttcagacgtgctg
aggtccacctggagagaaaacaacaacgccgagaggatcttcaacctgctgccagagaga
gacacacgctgttactctgctctgatcagaggcatggtgaagcatggagcctatgcgaag
gccttcagcgtatacacagacatgcttaacaacagagtgactgctgacgtgcacatcttc
aatgctctactgttggccactccagaagtcagagataaatacaaggagagatgggacctc
atcactgagctgttgaaccagatgaaggaacagaaagttcagcccaacctgctcaccttc
aacagtgtcctcaaagctctgcgacgctgtggctttctggccaaaacacaagctctttgc
actctgaatgagatgaaggctgtgggaatagcccccagcctggcctcctttgaccacatc
ctggcggtctttttcagagcagccaacactggtgagagcaacactgacgttttacaggaa
gtgatgtcagagctggcaggaagcagcctcagctgccaggaccccgatgatgttctgttc
ttctcaagcgcgatgagactatgcatggataataaagatctagagctgggctataaggtc
cagagtctagtagaacagggggagaactggaggcttctgggtgatacccaccagcagact
gttttttatggtcgcttcttcaacctgttatgtatgatggagcacattgacgtggtgctg
aagtggtacagacggctcgttccctcgttgtactacccgaaccatcatgggctgagggac
cttctgcaggctctggacacagacggtcgcctggaccttctgcccactatatggaaagac
atccggtctctgggtcacgacaacaagcccgatctggtggaggaggtgctcactctgatg
gccagggacacgcacagtccagaggttcaggaggcgttcgcgttgtgcgctctggatgtg
aagagtgtgtttggggcagacagagggaggcagagtctggagtggagcaacgcctccctc
tctcacatcacctccctgctgctgcgagccaacaaaacccaacaggcctgggagatgctg
cagctcttcaaatccgagaacagagttcccaacgaggggctgttgaaggacttcctgtcg
gcgtgccgcagccacggctctccctcaagagccgtagagctggtgcagctgtctgctgcc
ttctgtctgtccgcaacacccaaactggcgaagcaggcgctggccgagtttgacgtaacg
gaggagcagagagccgtgttatctgaactggaggctacaggagaggtctctgactga
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