Pungitius pungitius (ninespine stickleback): 119210570
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Entry
119210570 CDS
T07626
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04260
Cardiac muscle contraction
ppug04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119210570
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119210570
04261 Adrenergic signaling in cardiomyocytes
119210570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119210570
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119210570
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
DUF2201
Cache_3-Cache_2
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
119210570
NCBI-ProteinID:
XP_037316623
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Position
2:complement(3972740..4025754)
Genome browser
AA seq
1081 aa
AA seq
DB search
MDYSVCLLFLLSTISSASTGEFPTSLIIKEWVDQMQKELITLTDTASGLEKLIQIYHRHK
PHFSVETNNPAQLVATAAGNIEKLLYNRSQALRRLALEAEKFQMDHVWRGDSEVDKIVYY
NAKDNLNQTEDGKGRKNQYLPDDFETDPDFKRAVSYNTTAVHIPTDIYEGSTIILNELNW
TEALENVFRTNKEEDPSLLWQVFGSATGLARYFPASPWINARNSANKIDLYDVRRRPWYI
QGAASPKDMLILVDASGSVSGLTLKLIRTSVSKMLETLSDDDYVNVVYFNDKAEHAACFR
NLVQANVRNKRMLKDAVQSITAKGITNYRGGFEMAFEQLAQTNVSRANCNKIIMLFTDGG
EERAEEIFEKYNPKQAVRIFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRINTQE
YLDVLGRPMVKADRRAKQVQWTNVYLDALGLGLVITGTLPVFNKTNTGSKKSQNQLILGV
MAIDVSLEDIKRLTPQFTFGPNGYYFAIDPNGYVLLHPNLVPMTAEFDEPVTLDFLDAEL
ENEIKVKMRKEMIDGLRGNYTISTLVKSKDERYIDSGQRVYTFAPVKGTDYSLALVLPDY
STHYIRANIADTITQAKFSESLMADKFDEYGYTFIAPRTYCKDLKLPDKNQNNTEFLMDF
NDYIDTKTPNNPMCDVELLNRLLLDAGITSSLVKHWKTTQLQHGVVARFVATDGGITRVY
PKSAGLYWGKEAETYESSYYKRSLDNDLYIFTPTPYLSKENSSEDSVLVSKAVNLKVDGI
PLKPAVVGVKLDIGAWMESFINATQKINCNDEICGCQRNDAYVDCAILDDGGFLVMSNRD
EHIDEIGRFFGGIDPILMVNLVNSSLFTFKKTFDYQSRCYPEKESKAAAGLRSVYVPTIA
DILNLGWLASAAAWSIMQQLLVSITFPNFLDAAEMNDEMSDAARKEVCITEQTQYYFENN
IVSFKGTIDCENCTRLYHAEKLPKTNLVFVIADAKVTCSSCDTKPLIQDEQQSNGPDPCE
MAKNPRYRKGPAACFDNNEHDEAMCRRSAGSPLASSPLMLLLPLFMCCLGRRTLTAAGRP
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggattactccgtctgtttactttttctgctgtcaaccatctcatctgcgtcgaccgga
gaattccccacctcgctgataataaaggaatgggtggatcagatgcagaaagagttgatc
acattaacagatacagccagtggtctggaaaagctaatacagatctatcaccgacacaaa
cctcacttcagcgttgaaaccaacaacccagcgcaactggtggcgacagctgccgggaac
atagagaagctgctgtataaccgctcccaggccttaaggaggctggcactggaagcggaa
aagtttcagatggaccacgtgtggcggggcgacagcgaggtcgacaaaattgtttactac
aatgccaaagataatctcaatcagacggaggacggaaagggaaggaagaaccaatatctc
ccggacgactttgagaccgaccccgacttcaaacgggcggtctcgtacaacaccaccgcc
gtccacatcccgacggacatatacgaaggctcgaccatcattttgaatgagctaaattgg
acggaggccttggaaaatgtttttcgtacaaacaaagaggaagatccctcgttgctctgg
caggtgttcggctcggccaccggattggctcgctacttcccagcgtccccttggatcaac
gcgaggaattcagccaataagatcgacctctacgacgttcgcaggcgaccctggtacatt
cagggcgcggcgtcacccaaggacatgctgatcctggtggacgcgagtggcagcgtttcg
ggtctcaccctcaaactcatccgaacgtcggtcagcaagatgctggagaccctctctgac
gacgactacgtcaacgtggtctacttcaacgacaaggcggagcacgcggcctgcttcagg
aacctggtgcaggccaacgtccgcaacaagaggatgctgaaagacgccgtgcagagcatc
acggccaagggcatcaccaactaccgaggcggcttcgagatggccttcgagcagctggcg
cagacgaacgtgtcgagggccaactgcaacaagatcatcatgctgttcaccgatgggggg
gaggagcgggccgaggagatctttgaaaagtacaaccccaagcaagcggtgcgcatcttc
acattttcagtgggtcaacacaactacgacaagggaccaatacagtggatggcctgcgcg
aataaaggctactattacgagatcccgtctataggcgccatcaggatcaacactcaggag
tacctggatgttttgggcaggccgatggtcaaggctgaccgacgggccaagcaggtccag
tggaccaacgtctacctggacgcactggggctcggcctggtgatcaccggcaccctgccc
gtcttcaacaagaccaacacgggctcaaagaaatcccaaaaccagctcatcctgggggtg
atggccatcgacgtctccctggaagacatcaagagactgacgcctcagtttacatttgga
ccgaatggctactactttgccatcgaccccaacggatacgtgctgctccaccctaacctg
gtgccaatgactgcagagttcgacgaacctgtaacgcttgacttcctggatgctgagctg
gagaatgagatcaaagtgaagatgagaaaggaaatgatcgatggtttacgggggaattac
acaatatctacattggtgaaatccaaagatgagcgctacattgattcaggtcagagggtg
tacacttttgcgccagtgaaagggacggattacagcctcgctctggtgcttcccgactac
agcacgcactacatccgggccaacatcgccgacacaatcacccaggccaaattttctgaa
agcctgatggcggacaagttcgatgaatacggctataccttcatcgcaccgaggacgtac
tgcaaggacctaaagcttcccgacaagaaccaaaacaacacagagttcctcatggacttc
aacgattacattgacacaaagacgcccaacaaccccatgtgtgacgtggagctgttgaac
cgattgctcctggatgccggcatcacctcgtctctcgtcaagcattggaaaaccacccaa
ctgcagcacggtgtcgtggccagatttgttgccaccgatggagggatcacacgagtctac
cccaaaagcgctgggctgtactgggggaaggaagccgagacgtacgagtcaagttattac
aagaggagcttggacaatgacctgtacatcttcacgccgacgccctacctctccaaggag
aacagcagcgaggactccgttttggtgagcaaagcggtcaacctcaaggttgatggtatc
ccgctcaaacccgctgttgtcggtgtgaagctggacatcggtgcctggatggagagcttc
atcaacgccacgcagaagatcaactgcaacgacgagatctgcggctgccagcgcaacgac
gcgtatgtagactgtgccattctggacgacggcggcttcctggtgatgtccaatcgagac
gaacatattgacgagatcgggcgtttcttcggtggcatcgacccgatcctcatggtgaac
ctggtcaactcgtccctgttcacctttaagaagaccttcgactaccagtcgcgctgttac
cccgagaaggagagcaaggcggctgcaggcctgcgatccgtctacgtgcccacaatcgca
gatattttgaatttaggatggttggcgtcagccgcagcttggtcaataatgcaacagttg
ctggtcagcatcacatttcccaatttcctggacgcagccgagatgaacgacgaaatgtcc
gacgccgcgcgcaaagaggtctgcatcaccgagcaaacccaatactactttgagaacaac
atcgtgtctttcaagggaacgatcgactgtgaaaactgcaccaggctctaccacgccgaa
aagctgcccaagacgaacctggtcttcgtcatcgctgatgcaaaagtcacctgctcgtcc
tgcgacaccaagccgctgattcaggatgagcagcagtcgaatggtcccgatccctgcgag
atggcaaagaatccccggtacaggaaagggccggctgcttgttttgacaacaacgaacac
gacgaggccatgtgccgaaggagcgcaggctccccgttggcttcctctccgctcatgcta
ctgctgccgctgttcatgtgctgtctcgggagaaggaccctgactgcggcggggcgtccg
gcctga
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