Pungitius pungitius (ninespine stickleback): 119212580
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Entry
119212580 CDS
T07626
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119212580
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119212580
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
119212580
NCBI-ProteinID:
XP_037319037
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All DBs
Position
21:2714217..2726845
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AA seq
1241 aa
AA seq
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MRDAGRRDDGDNINKSGKDQSWIPKIIKKRVCTTFVEDSLSNGALCQCGGERDAHGSVAL
GDYFSTAIVNRWDSAQHSSEYPTDAFGELQFAGASRRHSHFLRLSWDTPPSLVYALMRNQ
WGLPAPNLVVSIVGGEGRTKVKTWVREVLRQGLVKASQSTGAWILTEGLREGACRCVGEA
VRDHATAASSVSLNRVVALGIAPWGLVDNKETLVNREGSFPAKYYVKNTSRDSHCLDNNH
QAFLLVDDGSVGRRGETGFRAKLEDFISHQPICGSGSIDIPVLCMLISGDAGMLERVDLS
LKSSMPWLVLAGSGGLADFLSDILDNLSPAAAAQSSGEGDGDGVDLKDKVAERVKKHFPA
EKEADKLVERALSIYQMRGLITVYHGEQEGPNDFDTVLLKTLVGASKHHASVDANPYNEE
LKLAVTWNRVDIAKSELFIEDIHWTYEDLKDSMTDALINDKPQFVRLFTENGFNILDYLT
YGRLESLYASVAEGTVLYHLLQRHLVERLGTAPSNQQDLPSIWVAENLQIGPVTEISLFE
VARVLELLMGDVCQPFYCDALGFEDLSSNRGALRRASKRVRGECSYQEERCLSPWTSLFI
WAVMQNSSEMATFFWEMAGESVLSALSGCKILREMSKLEEEMENKLSMKELAQRFENLAH
DMFSSCYRSNESRSFTLLIRKSTVWGGTTCLQMGMGADARLFFSHDGVQSLLSQIWWGDI
ERHTDVWKLVLTFFCPVLCYTNLISFRKQEDRHQGQDEKPYEDDTGKDIDSLDGQAVFSF
SDNPIDDDAQGSPPPRTPTIKGRRVSYRAPKRPFIVSRLRQFWFAPVTTFLSNVVMYFLF
LLLFAWVLLVDFKPPSSSGLALTEYVLYFWVFTIVCEEIREIFFLGTMSWRQRTRVYIDD
LWNKCDLIAIGLFITGVICRMFTWSYGFGRDVMCVDYMVFTVRLIHIFAIHKQLGPKIII
VGKMMKDIFFFLFFLMVWLMAYGVANQALLYSYDASLERILRRVFYRPYLHIFGQIPVEE
MDVGKEWDMPCTDNMTLIESGQEPCRTLHSNWLVVILLVVYLLVTNILLINLLIAMFSST
FSEVQANSDIYWKFQRYTLVVQYHSRPSLAPPFIILSHLNLFIKRVIRKVPSIKIQHFVL
ELKGKDANQLKTWETIQKEDFLTAQNKIQKSSDSQRLKRMSVKVDGVFKHMTESRDDVEH
RLRALENEMRENFSWIVDTLAQSGTFKPPRPPPTSRRTHDH
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgcaggaagaagagatgacggagacaacattaataaatccggaaaggaccag
agttggattcccaaaatcatcaagaaacgagtgtgcaccacctttgtggaagattctcta
agtaatggcgctctgtgtcagtgcggcggcgaaagagacgcccacggctccgtggctctc
ggtgactacttcagcacggccatcgtcaaccgctgggacagcgcccagcactcctctgag
tacccgacggatgccttcggagagttgcagtttgcaggagccagcaggaggcacagccat
ttcttgcgtctgtcatgggacacccccccgtccctcgtctacgccctgatgagaaaccag
tggggtcttcctgcacctaacctggtggtttctatagtgggcggagaagggaggacaaag
gtgaagacttgggtacgggaggtcctgaggcagggactggtgaaagcctcacaaagcaca
ggagcatggatcctgactgaaggcctgcgagaaggcgcttgccggtgtgttggagaggcg
gtgagggatcacgcaaccgcggcctcctcggtgtccctcaacagggtggtggcgctgggt
atcgctccctggggcctggtggacaacaaagagacgctagtcaaccgtgagggcagcttt
cctgctaagtattacgtcaagaacacgtcccgggactcccactgcctggacaacaaccac
caggccttcctgctggtggacgatggcagtgtgggacgcagaggagagacggggttcagg
gccaagctggaggacttcatctcccaccagcccatctgcggcagcggcagcattgacatc
cccgtcctttgtatgctgatatcaggggacgcaggaatgctggagagggtcgatctctct
ctcaaaagctccatgccctggctggtgctggccggctccggaggcctggccgacttcttg
agcgacatcctggacaatctgtcaccagccgcggccgcccagtcgtccggggagggagac
ggcgacggcgtggatttgaaagacaaagtggcagaacgggtcaaaaagcacttccctgct
gaaaaggaggcggacaaactagtcgaacgggctctgagcatctaccagatgagaggctta
attactgtctaccatggagagcaggagggcccaaatgactttgacacagtgctgctcaaa
acattggttggagctagtaagcatcatgcgtccgttgatgccaacccttacaacgaagag
ctgaagctagcggtcacatggaacagggttgacattgccaagagtgaacttttcattgaa
gacatccattggacgtatgaggacttaaaagactccatgacggatgccctgatcaacgac
aagcctcagtttgtgcgtctattcaccgagaatggcttcaacattctggactacctgact
tacggccggctggaaagcctttacgcctccgtggctgaagggacggtgctttaccatcta
cttcagcgccacctggtggagcggcttggaactgcaccgtcaaaccagcaggacttgcct
tccatctgggtggcagagaacctacagattggaccagtgactgagattagcctttttgag
gttgccagggtcctggagcttttgatgggtgacgtctgccagccattttactgtgatgct
ttaggctttgaagatttgtcatccaacaggggagcacttaggcgtgccagcaagcgggtg
cgtggagaatgctcttatcaagaagaacgctgcctctccccctggacctcactcttcatc
tgggccgtcatgcagaacagcagcgagatggcaactttcttctgggagatggcaggagag
tcggtgctcagtgctctgagtggctgtaagattctgagggaaatgtccaagttggaggag
gagatggaaaacaagctgtccatgaaggagctggcccagaggtttgagaacctggcacat
gacatgttcagctcttgctatcggagcaatgagagtcgctctttcaccctattgattagg
aaatctacagtttggggcggtaccacttgcctccagatgggcatgggcgctgacgcacga
ctgttcttcagccacgacggagtgcagtctttgttgtcccagatctggtggggggacata
gagagacacacagatgtgtggaagctcgtgctcaccttcttttgtcccgtcctctgctac
accaacctcatctctttcaggaagcaagaggaccggcatcaagggcaggacgagaagcct
tacgaggacgacacgggcaaggacatcgacagcctcgacggccaagcagtcttctctttc
tcagacaaccccattgacgatgacgcacaaggatcaccacctcccaggacaccaaccatc
aaagggagacgcgtctcttacagagcccccaagcgtccgttcatagtgtcgagattgcgt
cagttctggttcgcccccgtcaccacatttctgagcaacgttgtgatgtacttcctgttc
ctcctgctgtttgcctgggtgctgttggtggacttcaagcccccgtcctcctctggtctg
gccctcacggagtatgtgctgtacttctgggtattcaccatcgtgtgtgaggagatccgg
gagatattctttttagggacgatgagttggcgtcagaggaccagagtgtacattgatgat
ttgtggaacaagtgtgatctcattgccatcgggctgttcatcacgggagtaatctgcagg
atgttcacatggtcttatggatttggccgggatgtcatgtgtgttgactacatggtcttc
accgtccgtctcattcacatctttgccattcacaagcagctgggaccaaaaatcatcatc
gttggcaagatgatgaaggacatcttcttcttccttttcttcctgatggtgtggctcatg
gcgtacggagtagccaatcaggctctgctttactcgtatgacgcgagcttggagcgcatc
ttacgccgggttttctacaggccgtacttacacatctttggacagatccccgtggaagag
atggatgttgggaaggagtgggacatgccgtgcacagacaacatgacactgattgagagc
ggtcaggagccctgcaggactctgcatagtaactggctggtggtgattctgctggttgtt
tacctgctggtcaccaacatcctgctcatcaaccttctcatcgccatgtttagctccacc
ttctctgaagtccaggctaacagcgacatctactggaagttccagcgctacacgctggtg
gtccagtaccactcccgtccttccctggctcctcctttcatcatcctctctcacctcaat
ctcttcatcaaaagggtcatccgcaaagtgccctccatcaagatccaacattttgtgctg
gagttgaaagggaaagacgccaaccagctaaagacgtgggaaaccattcagaaggaggac
ttcttgacggcccagaacaagatccagaaaagcagtgactcgcagaggctcaaacggatg
tctgtcaaagtggacggtgtgtttaaacatatgactgaaagcagagacgacgttgagcac
aggctgagggctttggagaacgagatgagagaaaatttcagctggattgttgatactttg
gcacaaagcggcacttttaaacctcctcgtcctcctcccacatccagacgtacacatgac
cattaa
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