Pungitius pungitius (ninespine stickleback): 119212898
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Entry
119212898 CDS
T07626
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140
Autophagy - animal
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119212898 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119212898 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119212898 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119212898 (plekhm1)
Membrane trafficking [BR:
ppug04131
]
SNARE
SNARE associated proteins
Others
119212898 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
119212898 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_FGT1_2
Cytochrome_C7
Zn_ribbon_NrdR
Motif
Other DBs
NCBI-GeneID:
119212898
NCBI-ProteinID:
XP_037319654
LinkDB
All DBs
Position
21:14388206..14396414
Genome browser
AA seq
1061 aa
AA seq
DB search
MLATQMPDTPPETQDVKQIKEKLAQALKALQKRYVASDAVVTSEDGDANLLCCALEAVFI
HGIKSKYIRSVAGGRSRKGDRGSLPQPFFWSLLKAVTHRDVVKELEKISFVSTDVGRCRS
WLRLALNHGLLECYLTSLFREGSKLRAHYQPSALLLNAEEREVLLSYLQGLGSLTFSLSY
KSAVLNEWTTTPLALAGLCPSTQADAIDWPLNGGDAPTPKPELKESWDTASQSSGSSDAP
DMQRGCPATPTGTGTGALQGGSAALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPAG
EQWSSCDLDVPINVTISTNRPRKDSRTDFRESGHCSQDSMREDSLVSSLGPDAYSETAVF
SGSDSETQGPPTLPQDRSDPVLDPVPSDSEPPAAPDKNLANGSPFEAFIGTPPRSHPVTD
LVPTVREPVDGGHVGPGNLQVEREDGPSVDQASRCSSRILCSDSLSHSRSWISEDDIYKP
HPEEVSDRDEAPPPAPPTELQVSPSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTMGIWR
DHYCELSPFEFRLYLNAEERTCCDNCSLLRCEDARLASPAGRFELTFPGKRLCLRAADRG
EAEDWVDRIVEAVVKCRPAPCAVEQWEVLLPPCENGVDASCPPSPPDAGPLAPAPPPPPP
PPPPSAQEAFDWTRTADVENDAIKEAVLYFSADPEARTWAPLVFSLSLEALRGFQVQDGR
KLLRRTLPVDQIRDVVPDVSQGGAAFFKLLTLRETLRLKAENPKEASSWRVLIRGALDSY
LESGEDGGSEEPAGASPGATGNLYRLVQHRLKEDGALLAHLCAVPSEKGLDSQGFKCAGC
PQPIGPSRGRARLCEFSGQYYCDSCHHGDTTVIPSRMVHNWDLTRREVSKKALHLLAQVE
QEPLLNVEQLNPELVTHAESMSQAHQLRRRLRLLGDYLLTCRSGACKKLQAKMGQRTYPL
ESSHLYSVMDLRQVAGDEYVTYLVALTQHASNHVFHCDLCSQRGFICQICHADDIIFPFQ
LDITTRCEDCKAVFHLPCKAAGVPCPRCERMKKYLERNPLF
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagatgccagacacgccgcccgagacccaagatgtcaaacagatcaag
gagaagttggcacaggcactcaaggccctgcagaagagatacgtagcgtcagacgcagtg
gtcaccagtgaggatggggatgctaacctcctctgctgcgccctcgaggccgtcttcatc
cacggcatcaagagcaagtacatccgctcggtggctgggggccgcagtaggaagggggac
cgaggatccctccctcagcctttcttctggagcctcctcaaggctgtcacccaccgtgac
gtggtcaaagagctggagaagatcagcttcgtgagcacggacgtggggcgctgccggtcc
tggctgcggctggccctgaaccacggcctgctcgagtgctacctcacatcgctgtttcgc
gagggctccaaactgcgggcccactaccagcccagtgccttgctcctgaacgccgaggag
cgggaagtcctgctcagctacctccaaggtctgggctcgctcacgttcagcctctcctac
aagtcggccgtcctcaacgaatggaccaccacgccgctggccctcgcgggtctctgcccc
tcaacccaagcggacgccatcgactggccgctcaacggaggcgacgctcccacccccaag
cccgagttgaaggagtcgtgggacaccgcttctcagtcgtcgggctcatccgatgcacca
gacatgcagagaggctgcccagcgacgccgaccgggacggggacgggtgcattacaaggg
ggcagtgctgcactcaactcatctaatttaagccttgacaccacaggctcctctcagctc
tcctccagcttgagctctgatagcctcctgcaggggcaggacccccgcagcccagcggga
gagcagtggtcttcatgcgacctggacgtccccattaatgtcaccatcagcaccaacagg
ccacggaaggattctcggacagatttcagggagagtggccactgcagtcaggactccatg
cgtgaagactccttggtctccagcctgggtccagatgcgtattcggagacggccgttttc
agcggctcggacagcgagacccagggtccccctacgctgccccaagaccgctcggaccca
gtcctggaccctgtgccgtccgattcggagccaccggcggcaccggataagaacctcgct
aacggctctccctttgaagcgttcatcggcactcccccgcggtcacacccggtcacggac
ctggttcctaccgtcagggagcctgtggatggaggacacgtcggtcctggcaacctccag
gtggagagggaagatggaccttcagtggatcaagcctctcgttgctccagcaggatattg
tgctcagattctctatcacattctcgttcctggatctctgaggatgacatctacaagccc
cacccggaggaagtatcagaccgagacgaggctcctcccccggctccgcccactgagctc
caggtctctccgtcgccccccagtgtcgtccatcgcaggcaaataggtctgtccaaccct
ttccgcggcctgctgaagctcggccacctggagcgccgcggcaccatggggatttggcgc
gaccactactgcgagctgtcgcccttcgagttccgcctgtacctcaacgcggaggagcgc
acgtgctgcgacaactgctcgctgctgcgctgcgaggacgcccggctcgcctcgcccgcg
ggccgcttcgagctgaccttccccggcaagcggctgtgcctgcgcgcggccgaccgcggc
gaggccgaggactgggtggaccgcatagtggaggccgtcgtcaaatgccgcccggcgccc
tgcgcggtcgagcagtgggaggtgctgctgcccccctgcgagaacggcgtggacgcgtcg
tgcccgccgtcgccgccggacgcgggacctctcgctccggctccgccccctcctcctcct
cctcctcctccttccgcgcaggaggcgttcgactggactcggactgcggacgtggagaac
gatgcgatcaaggaagccgtgttgtacttctccgcggatccggaggctcggacgtgggcg
cctctggtcttctccctctccctggaggcgctgagggggttccaggtccaggacggcagg
aagttgctgcggcggacgctccccgtcgatcagatccgggacgtggtgcccgacgtgtcc
caggggggggcggccttttttaaactcctcaccctcagggagacgctgcgactcaaagca
gagaacccgaaggaggccagctcctggagggtcctgatccgaggagctctggactcgtac
ctggagagcggggaggacggaggctccgaggagcccgccggggcatcccccggtgcgacg
ggaaatctctacagactggtgcagcacaggctcaaagaagacggagcgctcctcgctcat
ctgtgcgccgttccctcggagaagggtctggactctcagggcttcaagtgtgccgggtgt
cctcagccgatcggcccgtcccggggccgagccaggctgtgcgagttctcgggccagtac
tactgtgactcctgtcaccacggcgacaccactgtcatcccctcgcgcatggtgcacaac
tgggacctcacgcggcgggaggtgtctaagaaggccctgcatctgctggctcaggtggag
caggagcctctgctgaacgtggagcagttgaacccggagctggtgacgcacgccgagtcc
atgtctcaggcccaccagctgcggaggaggctgcgcctgctgggcgactacttgctcacc
tgccgcagcggagcctgcaagaagctccaagccaaaatggggcagcggacgtacccgctg
gagtcgagccacctgtacagcgtcatggacctgcgacaggtagcgggcgacgagtatgtg
acctacctggtggcactgacgcagcacgcctccaaccacgtgttccactgtgacctgtgc
tctcagcgcggcttcatctgtcagatatgccacgctgatgacatcatcttcccctttcag
ctcgacatcaccaccaggtgtgaagattgtaaagctgtgtttcacctgccctgcaaggcc
gccggggtcccgtgtcctcgctgtgagcggatgaagaaatacctggagaggaatccgctg
ttctga
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