Pungitius pungitius (ninespine stickleback): 119214483
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Entry
119214483 CDS
T07626
Symbol
tiam1b
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04530
Tight junction
ppug04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119214483 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119214483 (tiam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119214483 (tiam1b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
119214483 (tiam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
119214483
NCBI-ProteinID:
XP_037322210
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MGNVESQNGDHTLYRNEHGYLSRKHMSRSLRISNKQSRRSRHASSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFNETTILPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMNTMHI
TLPGPTAEEVPDEDVYTGEVTYLQKTRDCSKETVSFKKKRSKSADMWRDDSLEFSLSDLS
QDHLTSTEEIIDTTNKGDFTDGKGHLKCSPTDSGDRANSLDELYSQKCPARRQPHGRYAK
WHGSSRVIREGEDDKMISPSEEDGNTYGAYTLPCRRSHCLSEGPSSHQAAMCASMQGRRA
QTIQDVTAGEGSEYEDSGIDGVTVEAEQQSRRYKTMSASFSVCSAAGRSMFAGSDSGSSS
GGGAGECVQGVYENFRQELEMSSCQTDSLEEAGSALSDEQSTMSSTYQSDPLLGVAQGMV
RKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYETDGRSGIDNNSIPKHA
VWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTYSQTELENWITAIHSACATAVARQH
HREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLEQF
HMDLFRFRCYLASLQGGELPNPKRLLAVASRPTKLAMGRLGIFSVSSFHALVAARSENGV
RRRTQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPSINQQVFADGTEQVKNPVNGIFDN
PTKENTETENGTVKSLPRHSTESDIWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVLET
ICKAYQLDPTKHYLRLKFFIENQGQFYIPKPEEDVYDLLYKEIELCCKITKVIQFDRDES
CMIGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKV
AFSQASLALTVNTLPSVERRQLCYLPPRRSDAEEDLYTDIFSQSQEEILDDGVGLLLESS
GDSLDDDSEIFSEFEGIKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPPATLRQLSD
ADKLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLLEMVEFQLE
FLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLV
KAKTDLNFKAFLEERNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYHL
DVAMKAMNKVASHINEMQKIHEEFGAVFDVLITEQSGEKKEVADLSMGDLLLHTSATWIN
PPASLGKWKKEPQMATFVFKMAVVFVCKEGSKQKKKMGGSHRVSVSSEEKDPFRYRHMIP
TNSLQVRSLANADGEGSAVCEIVHTKSESEGRPERTFQLCCSSPESRKDFLKTVHSILRE
KHRRQLLKTESLPVKQQYVPFGGKRLCALKGARPAINRAASVPTRTLGRRKLVRNRFTID
TDIVFDGEPGQELTSPQEPDSNQPQQDNEPDKLQQSELAGDTDRWVEQQFDLEEYEDKEV
VKETDILSDEDDELCQTPGAFSAEAELDAPVMALSLESEETSEGESLQSPKASSSPDDEQ
SDDVNNAAEGKKQTEMDEIWVKRQQSGLSPESGT
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgttgaaagccagaatggggaccacaccctgtaccgcaacgaacatggctat
ttgtcacgtaagcacatgtctcggtctcttcgcatctctaacaaacagtccaggcgctct
cgacatgcttcgtcagggaaaatagagcaccggaattctgaaacgagcacacgctcaagt
agcacgcctagtatcccacaatccctggctgacaatggcctggagcccttcaatgaaaca
actatcctcccagactttggaagccccatttgggtggaccgtgtggccatgaacctgcgg
cctgtgtcctttcacaacgacctcgccaatccctcagtgcacatgaatacgatgcacata
acgctacctggccccacagccgaggaggtgccggatgaagatgtgtacacgggcgaggta
acgtaccttcagaaaacccgggattgctctaaggagacagtcagcttcaagaaaaagagg
tctaagtctgcagacatgtggcgagatgacagcctggagttctccctgtctgatctcagt
caagaccacctgaccagcacagaggagatcatagacacgaccaacaagggggactttact
gacggcaaaggacacctgaagtgcagccccacagacagcggcgacagggccaactccctg
gacgagctgtatagccaaaagtgccccgcccgccggcagccccacggccgctatgccaag
tggcatggcagcagcagggttatcagggagggtgaggatgataagatgatctcgccttca
gaggaggatgggaacacctatggtgcatacaccctcccctgccggcgttcccattgcctt
tccgaaggcccgagcagccaccaagcggccatgtgtgccagtatgcagggcaggagggct
cagactatacaggatgtcactgccggagagggcagtgagtatgaggacagcggcatcgat
ggggtgactgtggaggcagagcaacagtccaggcgctacaagaccatgtcagcctccttc
tccgtgtgctcggcagctggcaggagcatgtttgctggcagtgacagcggcagcagcagt
ggcggtggggccggcgagtgtgtacagggcgtgtacgagaactttcgccaagaactggag
atgagctcctgccagacagatagcttggaggaggcagggtccgccctgagtgacgagcag
agcactatgagctccacctaccaatccgacccgttgctcggcgtcgcccaggggatggta
cgcaaagctggcaggctcgccgtcaagaacttcctcgtacataagaagaacaagaaagtg
gaatcagccacaaggcgcaagtggaaaagttactgggtttccctgaaaggttgtactcta
ttcttctatgaaactgatggccgttcagggattgacaacaacagtattcctaagcatgcc
gtctgggtggagaacagtattgtccaggctgtacccgagcatcccaaaaaagactttgtg
ttctgtctcagcaactccctgggagatgcttttctgtttcagacctacagccagacggag
ctggagaattggattacagccatccactctgcatgtgccactgctgtcgcccgccagcat
cacagagaggacacggtgcgcctgcttcgcgcagagatcaagaagcttgagcagaagata
gatatggatgagaagatgaagaagatgggagacatgcagctgtcggctgttactgacacc
aagaagagaaagacgatcctggatcaaatcttcctgtgggagcagaaccttgagcagttt
catatggatctattccgcttcaggtgctacctggccagcctgcaaggtggagagctgccc
aaccccaaacgtctcctggctgttgcatctcgtcccaccaagctggcaatgggccgactg
ggcatattctctgtgtcttccttccatgcactggtggcagctcgctcagagaacggagtg
agaaggcgaacacaggccatgtctcgttcctgtagcaaacgcaagagcaggttctcctcc
ctctggggtcttgacactacctcaaagaaaaaaacaaaagcccatcccagtatcaaccag
caggtctttgctgatggcacagagcaagtgaaaaaccctgttaatggcatatttgataat
ccaaccaaggaaaatacagaaaccgagaatggaactgtgaaaagccttcctcggcacagc
acagagagtgatatttgggttcctgaccacctcaccccctcatgggtgtgtttgccgaat
gaccagccagtgctgaccatcatccagccgggggagtccgcgctgtgcgttctggagacc
atctgcaaggcctaccagcttgatcccaccaagcactacttgagactcaaattctttatc
gaaaaccaaggacaattttatatccccaaaccagaggaggatgtgtatgacttgctttac
aaagaaattgagctctgctgcaaaattactaaagtaatccagtttgacagagatgaatca
tgcatgatcggctacggtttctccatttcagtggtggaggaggacggagtgcagcagctc
tacatcactgatgtgaaggcgggcggattagcttttgccaaaggtctcaatgcaggggat
gaaatactccagttgaacggaaaagactctcacagtctcaacttctccgacatgaaagta
gctttctctcaggcctcgctggctttgaccgttaacaccttgccgtctgtggagcgccgc
cagctctgctatctgccgccccgccgctcagatgctgaggaggatctatacacggacatc
ttctcccagagtcaagaggagattctagacgacggggtgggacttctgctcgagagctca
ggagacagcctggacgatgactctgaaatcttcagtgagtttgagggcataaagagtaca
gagcaagtcgctgccttctgtcgcagtctccatgacatgaatccctcggagtgtgtgtca
tcttcgcctagcccggactctcctttcccaccacctgcaacgctccgacagctttccgac
gctgacaagctccgcaaagtcatctgtgaactcgtggagaccgaacgcacctatgtcaaa
gatctcaattgtctcattgggagatatttaacgccactgcagaaagagacattcctcaca
caggatgagctggatgtgctatttgggaacttgctagaaatggtggagtttcagttggag
tttctcaagaccctggaagatgggaccagactggttcccgatctagaaaaattggagcga
gtggaccagtttaagaaaatcctcttctcgctgggaggctctttcctgtactacgcagac
cgttttaaaatctacagcgccttctgcgccagccacaccaaggtccctaaagtccttgta
aaagccaaaaccgatctgaatttcaaggccttcctggaggagcgcaaccccaagcagcag
cactcttccaccctggagtcatacctgatcaagcccatccaaagggtgctgaagtatccc
ctcctgctgaaggagctctactcgctcacagacccagacagtgaggagcactaccatctg
gatgttgccatgaaagccatgaacaaagttgccagccacatcaacgagatgcagaagatc
catgaggagttcggagccgtgttcgatgtgctcatcactgagcagagtggtgaaaagaaa
gaggtggctgatctgtctatgggtgatctgctactccacaccagcgcgacttggatcaac
ccccctgcctccttggggaaatggaagaaagagccccagatggccacatttgtgttcaaa
atggcagtggtctttgtctgcaaggagggatccaagcaaaaaaagaaaatgggtggctcc
catcgagtctctgtatcttctgaggaaaaggatcccttcagatatcgtcacatgatccca
actaattcccttcaagtcaggtccttggccaatgcagacggtgaaggctcggcggtttgt
gagattgtccacacaaagtcagagtccgagggaaggccagagaggacatttcagctgtgc
tgtagttcaccagagagtagaaaagactttctgaagaccgtacattccatcttgagggaa
aagcaccgcagacagctcctaaaaaccgagagtttacccgtcaaacagcagtatgtgccc
tttggtggaaagcgcctctgtgccctgaagggagcccgtccagccataaatagagcagca
tctgtacccaccaggactctaggcaggaggaagttggtgcgcaaccggttcactatagac
accgacattgtttttgacggcgagcccggacaggaactcacttccccacaggagcccgac
tcgaatcagccgcagcaagacaacgaaccagataagctccagcagtctgagttggcaggt
gacacagaccgctgggtggagcaacagtttgacctcgaagaatacgaggacaaggaagtg
gtgaaggagacagacatccttagtgatgaagacgatgagctctgccagacacccggagcg
ttctccgctgaggccgagctcgacgcgcccgtcatggctttgtccttagagagtgaggag
accagtgagggcgagagccttcagtccccaaaggccagcagtagccctgatgacgagcag
agcgacgatgtcaataacgccgcggagggtaaaaaacaaaccgagatggatgagatatgg
gtcaaaaggcagcagtcagggttgtccccagaatctggcacataa
DBGET
integrated database retrieval system
