Pungitius pungitius (ninespine stickleback): 119214561
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Entry
119214561 CDS
T07626
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04217
Necroptosis
ppug04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119214561 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119214561 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119214561 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119214561 (tnfaip3)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119214561 (tnfaip3)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C64
119214561 (tnfaip3)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
119214561 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
119214561
NCBI-ProteinID:
XP_037322286
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All DBs
Position
13:4487921..4497146
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AA seq
843 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAASSGLMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHATSQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLRSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PASSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVSLINPGRGGFEELKVHFLMEKEQQQ
KERLLKEYLLLIEIPVIGLGYDTTRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGM
RIEGVVQTKGGGVQGGVGVIGGSEIEVSSRGARGSSPPSSASGRGVVISSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCDRCFNSRQNHGPPGAGTAAPGPPGPNGGPTV
PHPAQGTGWTQWGSRETETERCSMCRQEAFRIFNGLCPPCMQGQQPPERGEPQQNNPRTE
ASSSAWTQARDTERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQ
TNHHLTPPPPPPPATVQSRHGGEAGFQNASRCRGPGCGAVGKAMLEGYCDKCYVKEQSTR
LNQAAHRTPHSPPPVMRDRAAKPRSSQQSQTQTQTQTQTQTQTQTQTQTQCRRSGCSNVS
PGCTDLCPECHTRGQGREAGRRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQI
YRG
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtctccaacctgctgaaggcg
gtgaagatccgccagcgagtgcccaacgacgtggtcaagccggctgccagcagcggccta
atgcaccacctgcggggtatgcaccggtacacgctggagatgatcgccatgaaccacttc
ccgcaggccttcagggaggtggtgcaggccgccatcctggaccgagccatgcaggcctcc
ctggagcaggagaagaagctcaactggtgtcgggaagtgaagaagatggtgcccttgcgt
acaaatggagatgggaactgcttgctgcacgcgacctctcagtacatgctgggcgtccag
gacacggacctggtgcttcggaaagccctccatggcgttttgaaagagacggacaccggc
gtgttcagagctcgcttccaggcggagctgctccggtcccaggagttcactcagaccgga
ctccggtacaccacgatgaattgggaggaagagtgggagaagattgtgaagatggcgtct
ccggcctccagtagcaacggcctccagtttgactctctggaggacattcacatctttgtc
ctttccaacattctccgccgtcccatcattgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctctgaatgtgggtgggatttatctgccgctgcactgg
ccgcccacagagtgctacaaatacccaatagtgctcggctacgactcccaacactttgca
ccgctcatcaccatcaaagacagcggcccggagatccgagcagtatcgctgatcaaccca
ggacgggggggcttcgaggagctgaaggttcacttcctgatggagaaagaacagcagcag
aaggagcggcttcttaaagagtacctgctgctgatagagatccccgtcattggcttaggc
tacgacaccacacggatcatcaacgccgcacggctggatgagggcaacctccccgaggac
atgaacctgatggaggactacctgcagcttgtcaatcacgagtaccagcgctggcaggag
gacaaggagcaggcgtgggccgcccagccgcagcgcccgcctcccttctccgtctcccag
ctgtccctcatcgagatccgctgcgccacaccgcgatgcaccttctacgtgtcggtggac
acgcagcctcactgccacgaatgctttgagaagcgacaggccaccaccggcggtggaatg
aggatagaaggggtcgtgcagaccaagggaggaggggtgcaaggtggggtcggagtgatc
ggggggtcggagatcgaggtgagctccagaggagctcggggcagcagccccccgtcctcc
gcgtccgggagaggggtggtgatatccagcccccgctcggccccacccaccgcccccagc
ctcagcctgtacagcgagacccacgccatgaagtgcaagacacccggctgcctcttcacc
ctcagcgtggagcatgatggactttgcgatcgctgcttcaactcccggcagaaccacgga
ccccctggagccggcacggctgccccgggacccccgggccccaacggggggcctacggtc
ccacacccggcccagggcaccggctggacccagtgggggagccgtgagacggagacagag
cgctgcagcatgtgcagacaggaggcgttcaggatattcaatggcctttgcccaccgtgc
atgcaggggcagcagcctccagagaggggagagccgcagcagaacaaccccaggaccgag
gcctcgtcttcagcttggacacaggccagggacacggagaggccgtgcctcaccctaacc
ccggggcacacctcggcctggcaagcccccctggcccggccttgtaaacgatccggctgc
cagttctttgggacgccggagaagttgggtttctgcactatttgctacgtagactatcag
accaaccaccacctgacccctcccccgccccctccccctgccacggtccagagccggcat
ggcggggaggcgggcttccagaacgcctcccggtgtcgagggcctgggtgcggtgcagtt
ggcaaggccatgctggagggctactgcgacaagtgctacgtcaaagagcaaagcacgcgg
ctcaaccaggcggcccatcgcacaccgcactcccctcctccggtcatgcgcgaccgagca
gccaaacccagatcttcacagcaatcccagacgcagacgcagacccaaacccaaacccag
acgcagacgcagactcagactcagacccagtgccggcggagcggctgcagtaacgtctcc
ccgggctgcacagacctctgccccgagtgccacacgcgcggccagggcagagaggcgggc
aggcgggcgcaggcgcccaaggagaagtccaagcagcggtgcaggacgcagggctgcgac
cactacgccaaccaagagaaacagggctactgcaacgagtgcgaccacttcaaacagatt
taccgcggctga
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