KEGG   Pungitius pungitius (ninespine stickleback): 119215176
Entry
119215176         CDS       T07626                                 
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
  KO
K05731  T-lymphoma invasion and metastasis-inducing protein 1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04530  Tight junction
ppug04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119215176 (tiam1a)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    119215176 (tiam1a)
SSDB
Motif
Pfam: PH_Tiam1 RhoGEF Tiam_CC_Ex PH RBD PH_9 PDZ SOS1_NGEF_PH PDZ_6 PH_10 PDZ_2 RNA_pol_Rpc82
Other DBs
NCBI-GeneID: 119215176
NCBI-ProteinID: XP_037322992
LinkDB
Position
16:11661327..11706617
AA seq 1673 aa
MGNAESQNGDSGFYGDVTAHLSRKHTSRSLRISSKQPVARRSRHSSSVKQEHRNSDASTR
SSSTPSIPQSLAENGQEPFTATDAFGDFGINPHWTQRVAMTMRPESYQQDDDPSATPTPE
TSEADTVAPAGGEDSMGEEEDVVGEERYLQRMTEGPREGGSFKKKRSKSADMWREDSLEF
SMSDLSQEHLTSTEEMIDGGEEEVEEQFTRPRGNAGSAERASSLDHLCSQQSPGLRGQRS
RYAKNRREAPCDEDGGGEEGLMSPSEEDGGGYGAFTLPCRRSHCLSEGLGGLGVPAAPCP
GFQGRRAQTTQDISGVLGEGSEYGDSGIDGVTAETDGDGELVSRRCKAMSASFSVYSATE
SSLFNGSDSGSSSAGGGEGRAGDGGRGGVYENFRKELDNQAWTHQGRDCAEEAGSAVSDE
RSSCTLSGAYPADILIGCAQGIVRKAGALAVKNFLVHKKNKKVEPATKRKWKHYWVSLKG
CTLFLYESDGRSGIDHNSVPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQTSG
QTELENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTV
TDAKKRKTILEQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKLAM
GRLGIFSVSSFHALVSARTESSIRRRNQAMPRTFSKRRSRFSSLWGLDTTSKRKTKGHPS
LNQVFVDGMEPVKKPLERMFEDSASEKSKEKEGSVKNLPQQNVDSDIWVPDYLAPSWVCL
PNNHPVLAIVQPGETALEVLSSICKTHQIDPSSHYLRLKMWIDNQILFYVPKLEEDISDL
LYKEIEVRPKLTKVIRFDKAESSTIGFGFSVAVIDEEGTQQLHITEVKAEGLASAKGLKA
GDEILLLNGKPASALQMDDMRAAFVNQALTLSVSTLPQLDPRVLCCLPPRRSDGEQDAAT
DIFSQSQEDILDEVSGLTVESPDESLEEGPRLTLQSPEDHQEDQTCVGTGQKSTEQVTAF
CRSLHDMNPLECPMSSSSSSSSSSLSPSPVSALPPAAGIATQRQLSHADKLRKVINELVE
TEKTYVKDLSCLIECYLTPLQKESFLTQDELDVLFGNLGEMVEFQGEFLQTLEDGIRLVP
NLDRLEKVEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPDFKAFLA
ERNPRQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTHPDSEEHYHLDVAMKAMNKVASH
INEMQKLHEEYGAVFDQLINDQTSDKKEVADLSMGDLLLHSTVVWLNPPAFLVKSKKERD
MAAFVFKTAVVFVYKDSSKHRKKIGGTHRASVIDDKDPFRFRHMIATDSLQVRAPANSEG
TAVCEIVHTRSESEGRPEATFQLCCSSPESKKDFLKAVHSILREKQRRQLLQTESLPPNQ
RYVPFGGKRLCALKGARPIMNRAASAPSRRLPRKKQARNRFTIDTDLVYHGNNNNGNDSD
PSRQSSYPPPLSRHALPQSNKPQGEDTDRWVEEQFDLGRYEEGAEGVGAGQLKETDILSD
DDEYCKSVRAASAEPDRLERRMEGLDLRVNGARGHRLNGRAERGSEAAAPEEEEEVDRVG
SGSRGVSLSRCATPTVKLGPLKQCVAEGATNKSRDVIWVRRDNFANGCKSDVF
NT seq 5022 nt   +upstreamnt  +downstreamnt
atgggaaacgccgaaagtcaaaacggggacagtggtttctacggcgacgtgacggcgcac
ctctcccgcaagcacacgtccaggtcactccgcatctccagcaagcagccggtcgcccgc
cgctctcgccactcttcctcggtgaaacaggaacacagaaactctgatgcctcaacgcgc
tcctccagcaccccgagcatcccgcagtccttggcggagaacggccaggaacctttcacc
gccacggacgcgttcggggactttggcatcaaccctcactggacgcagcgcgttgccatg
acgatgaggccggagtcctaccagcaggacgacgacccgtcggccacgccgactcccgaa
acctcggaggcggacactgtcgctccggctggtggagaggactccatgggggaggaggag
gacgtcgttggggaggaacggtacctccagcgaatgactgagggtccgcgggagggaggg
agctttaaaaagaagaggtccaagtcagccgacatgtggagggaagatagcttggagttc
tccatgtcggacctgagccaggagcatctgaccagtactgaggagatgatagacggagga
gaagaagaggtggaggagcagttcacacgccccagaggcaatgcaggctcagctgaaagg
gcatcgtctctggaccatctgtgcagccagcagagtcccggcctcagggggcagaggagc
cgctatgcaaaaaaccggagagaagccccatgtgatgaagatggaggaggggaggagggg
ttgatgtctcccagcgaggaggatggtggcggctacggagcgttcacgctcccttgccga
cgctcccactgcctgtcggagggcttgggggggctcggggtccctgccgcaccgtgcccc
ggtttccagggacggcgtgcacaaactactcaggacatctctggggttttgggcgagggc
agtgagtacggcgacagtggcatcgacggcgtcaccgcggagacggacggggacggggag
ctggtgtcgcggcgctgcaaggccatgtcggcctccttctccgtctactcggctactgag
agcagccttttcaacgggagcgatagcgggagcagcagtgcaggaggaggggaaggacga
gcaggcgatggaggcaggggaggcgtgtacgagaatttccggaaggagctggacaatcaa
gcctggacacatcagggtcgggactgcgccgaggaggccggatctgccgtgagcgacgag
cggagcagctgcacactgagtggtgcgtatccagcggacattctgattggctgcgcacaa
ggcatagtcaggaaggcgggagcgctggctgtgaagaacttcttggttcataagaaaaac
aagaaagtggaacctgcaacaaaacgcaagtggaaacactactgggtctctttgaaaggc
tgcactcttttcctgtacgagtcagacggtcgttccgggatcgaccataacagcgttccc
aaacacgcattgtgggtggagaacagcattgtccaggccgtacctgaacaccccaagaaa
gattttgtcttctgcctcagcaactcagtgggagacgctttcctcttccagacgtcgggc
cagacagaactggagaactggatcacagcgatccactctgcgtgcgccgctgccctggcc
cggcagcaccaccgggaggatacggttcgacttctgcgcacggaaatccgcaaactggag
caaaagatcgacatggacgagaagatgaagaaaatgggagacatgcagctgtcgacagtc
actgacgccaagaagaggaagaccattttggagcagatcttcttgtgggagcagaacttg
gagcggtttcacatggacctgtttcgctgccggtgctacctggccagtctgcagggcggc
gaaccccccaaccccaaacggctgctgggctttgcctcgcgtcccaccaagctggccatg
ggacgacttggcatcttctccgtctcttccttccatgcgctggtgtcagctcgcactgaa
agcagcatcaggaggcggaaccaggccatgcctcgaaccttcagcaaacgtcggagccgc
ttctcatccctctggggcctggacaccacctcaaagaggaagaccaagggacatccctcc
ctcaaccaggtcttcgttgatgggatggagccagtgaaaaagccattggagcgcatgttt
gaagactcagccagtgagaaatctaaggagaaagagggctctgtgaaaaatcttcctcag
caaaacgtagacagcgacatttgggttcctgattacctggctccctcctgggtgtgtctg
cccaacaatcaccccgtcttggccatcgtgcagcccggcgagacagcgctggaggtcctg
agctccatctgcaagacccatcaaatagacccctccagccactacctgcgtttgaaaatg
tggatcgacaaccaaatactcttttatgttcccaaacttgaagaggatatttctgatctg
ctctacaaagagattgaggttcgccccaaacttaccaaggtgatccggtttgacaaagca
gagtccagcaccatcggatttggtttttctgtggcagttatagatgaggaggggacacag
cagctccatatcacggaagtgaaagcagagggactggcctctgctaaaggtttaaaagca
ggggatgagattttgctgctgaatggaaaacccgcgtccgccctccaaatggatgacatg
agggctgcgtttgtaaaccaagcgctgaccttgagcgtcagcaccctgccccagctggac
cctcgggtgctgtgctgccttcctccgcggcgctccgacggggagcaggacgccgccact
gacatcttctcccagagccaagaggacatcctggatgaggtgtctggtttgactgtggag
agcccggatgagagtttagaggaaggacctcggctgactctgcaaagtcctgaagatcat
caggaggaccaaacgtgcgtggggactggacaaaagagcacagagcaggtcactgctttc
tgccgcagtctccatgacatgaatcccctggagtgcccgatgtcatcctcctcgtcttcg
tcctcgtcatccctctccccgagccccgtgtcggctctaccgcccgcggcgggcattgcc
acccagaggcagctctcccacgcggacaaactccgcaaggtcatcaacgaacttgtggag
acggagaagacatacgtcaaagacctgagctgcctcatagagtgctacttaacacctttg
cagaaagagagcttccttacacaggatgagctggacgttttgttcggtaacctcggggag
atggtggagttccagggggagtttctgcagacactggaagatggaatcagactggtgcct
aatctggaccgattggaaaaggtggagcagtttaagaaagtgctgttctccttgggaggt
tcattcctgtattacgccgatcgcttcaagatctacagcgccttctgcgccagccacacc
aaggtccccaaggtcctggctaaagcgaaaaccgacccagatttcaaggcttttttggcc
gagagaaacccgagacagcagcattcatccactctggagtcttacttgatcaaacccatc
cagagggtcctgaagtacccgttgctgctcaaggagctttactcgctcacgcaccctgac
agcgaggagcactaccacctagacgttgctatgaaggccatgaataaagttgcgagccac
atcaatgagatgcaaaagcttcatgaggagtacggagcggttttcgaccagctcatcaat
gaccaaacttcagataaaaaagaggtggctgacctgtcaatgggtgatcttttgcttcat
tctactgtggtgtggctcaaccctccagcctttttggtcaagagcaaaaaggaacgtgat
atggctgcttttgtgttcaaaacggcagttgtatttgtgtacaaagacagctccaagcac
aggaaaaaaattggtggaactcaccgagcatctgtgattgatgacaaagatcctttccgt
ttccgtcacatgatcgcaacagactctctgcaagtccgtgcccctgcaaactccgagggt
acagcggtatgtgagatcgttcacacgagatctgaatccgaaggaagaccagaggcaacc
ttccagttgtgctgcagttctccagaaagtaagaaggacttcctgaaagcagtccactcc
atccttcgggaaaagcagcgtcggcagcttcttcaaaccgagtctctgccgcccaaccag
cggtacgtcccgttcgggggcaaacgtctgtgtgccctcaaaggagcgcggcccatcatg
aaccgagcagcatcagctccatcacgcaggctgccccgcaaaaaacaggcgaggaaccgc
ttcaccatcgacaccgacctggtctaccacggcaacaacaacaacggcaacgattcggac
ccctcccgccagtcctcttacccgccgcctctgtcgcggcacgctctccctcaatcgaac
aaaccccaaggggaggacacggaccgctgggtggaggaacagtttgacctgggccgctac
gaagaaggggccgagggcgtcggcgcggggcagctgaaggagacggacatcctgagcgac
gacgacgagtactgcaagtcggtccgagccgcttcggcggagccggaccgcctggagagg
aggatggagggactcgaccttcgggtgaacggggccaggggccaccgcctcaacgggagg
gcggagcgcggaagcgaggcggcggcgccggaggaggaggaggaagttgaccgagtgggc
tcagggtctcgtggcgtctcgctgtctcgctgtgccaccccgactgtaaagctcggcccc
ctgaagcagtgcgtcgcggagggggccacgaataagagccgtgatgtcatctgggtgcgg
cgggacaacttcgctaacgggtgcaaaagtgacgttttctga

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