Pungitius pungitius (ninespine stickleback): 119215381
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Entry
119215381 CDS
T07626
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00780
Biotin metabolism
ppug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
119215381 (hlcs)
Enzymes [BR:
ppug01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
119215381 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
119215381 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
119215381 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
119215381 (hlcs)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
119215381
NCBI-ProteinID:
XP_037323395
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All DBs
Position
16:956866..979645
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AA seq
863 aa
AA seq
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MLITLCYVYMWVRFHKCYSVLIRNSLSRLSSGSFSFSFGVCSSSATASRTGRHTAALRQP
GVLPAEDNVFLQLGDRAVYVTEPQVLKWSDHCLPLARSPGQPFRAVAQASVDNFSLLGVA
FIEDRLQLDNGLAPSKIIPVLLQDSTLRELLENQGPNAETPPCLCATEPLHRHPTCCKGS
LLLTPQVRRRLEERRGSEPLCGIKGPGRDCDSEDRSLVHHHHMEGHRHLHLSSCHECLEL
ENSTILSVKYASAENIPDLPNDDSAGLDSGDETVDDAEHGANGLSGQGDGLDFTSKPPNV
LLYTGDCQQRFQSVRQILSECINMEDNIIYPLQSKQALSEPWLDNAKLLVLAEEEPLSPQ
LQTRFLTYLSQGGKVLGLASTLCPAGLCLEAREEQRGRVGRLSFTREDSTELELGVLSSG
KVYVRDTQGGGEVELWGELKGDAMHQRDMVVVRVTHGEDGGEAVLCQAHLEIAPDPKNLT
AKGFNELKVSNVLRYEVLTEILSSLGVSCKLNQTPDPSPVHLLATSQEARTTFVDWLRTH
ADQNGLLTLPKASLSLVSTSRLQDGPSLPEGSVALVTDSLGSQSWPQFSMETYREHLKTS
LLGHTVLYAEVTTSTMDLLQGLTLHLPKDVGLIAVSARQSQGRGRGGNAWLSPLGCAMFT
LTLQVELSSRLGQRIPFLQHLAALAAVEAVRTLPGYQDIDLRVKWPNDIYYGNLMKLGGV
LVTSTVIGSTFHLLIGCGFNVTNSNPTVCINDLIQQHNTRNNCSLQPLRCDQLIARTLCC
LEALIASFQRGGPDAVLPTYYKRWLHSGTRVRLWSEDGLEAEVVGLDHNGFLQVHNKEQG
VVSVEPDGNSFDMLKNLVVIKQR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgttgtgctacgtctatatgtgggtgcgctttcacaagtgctactcggtt
ttgatacgaaacagcttgtcccgactgagcagcggcagcttcagcttcagcttcggggtc
tgctccagctcggccaccgcttcacggaccgggcgccacacagcggcgctccggcagccc
ggtgtgcttccggccgaggacaacgtcttcctccagctgggggacagggccgtctatgtc
acggagcctcaggtgctgaagtggtctgaccactgcctccctctggcccgtagtcccggc
cagcccttcagggccgtggctcaggccagcgtggacaacttcagtcttctgggcgtggct
tttatcgaagaccgccttcagctggacaatggactcgcgccttcaaagataatccctgtc
ctcctccaagattccaccctcagggagctgctggagaatcagggccccaacgctgagaca
ccaccttgtctctgcgccactgagcctttgcaccgtcacccgacgtgctgtaaaggcagc
ctcctcctcaccccgcaggtcaggaggaggctggaggagcggcgggggtcagagccgctc
tgtggcatcaaaggcccgggacgcgattgtgactcggaggaccgctccttggtgcaccat
caccacatggagggccacagacacctccatctgtccagctgccacgagtgcttggaattg
gagaacagcaccatcctctcggtgaagtacgcctcggctgagaacatcccggaccttccc
aatgatgactcggcaggactggacagcggagacgagactgtggacgatgctgagcacggg
gccaatgggttgtctgggcagggcgatggactggactttactagcaagccacccaatgtt
cttctttacacgggcgactgccagcagcgttttcagtcagtccggcagattctgtcagag
tgcataaacatggaagacaacataatatatcccctccagtcaaagcaggctctcagcgaa
ccttggctggacaacgccaagctcctcgtcctggcagaagaggagcccctgtccccacag
ctgcagacccgttttctcacctacctgagccagggtggcaaggtgctggggctcgcctcc
accctgtgcccggcgggcctctgcctggaggccagggaggagcagcgtggtcgggtcggc
aggctgagcttcaccagagaggacagcacagagctggagctgggcgtgctgtcgagcggg
aaggtctacgtcagggacacgcagggaggaggggaagtggagctctggggggagctgaaa
ggggacgctatgcatcagagggacatggttgtagtcagggtgacccacggagaggacggt
ggggaggctgtcctctgtcaggcccacctggaaattgctcccgacccaaagaatttgacg
gccaaaggtttcaatgaactgaaagtgagcaacgtgctgcgttacgaggtcttgacggag
atcctctcctctctgggcgtaagctgcaagctgaaccagactccagacccaagtccagtc
cacctactggccacctctcaggaggcccggaccacctttgtggattggctgcggacacat
gccgatcaaaatggcctcctcacgttgcccaaggcctcgctctcgttggtgtccacttcg
cggctccaggacggcccttcgctccccgagggctccgtggccctggtcactgactcttta
ggctcccagagctggcctcagttcagcatggagacctacagggagcacctgaagaccagc
ctactggggcacaccgtgctgtatgccgaggtcactacgtccaccatggacctactgcaa
ggtctgactcttcacttgccaaaggacgtgggtctgatcgctgtctctgctcgacaaagc
cagggcagaggtcggggcgggaatgcatggctcagccctctgggctgcgctatgttcact
ctgacgctccaggtggagctgagctcaaggctcgggcagaggatccccttcttacagcat
ctggccgctctggcggcggtggaggcagtccgcactcttcctggataccaggacatagac
ttgagggtgaagtggcccaatgacatctactacggtaacctgatgaagctcgggggagta
ctggtgacttccactgttataggatcgacctttcacctgctcataggctgtgggttcaac
gtgacaaacagcaaccccacggtgtgcatcaatgacctgatccagcagcacaacacgcgc
aataactgcagcctgcagccgctccgctgcgaccagctcatcgcccgcacgctctgctgc
ctggaggccctcatcgccagcttccagcgggggggcccggatgccgtcctgcccacctac
tacaagagatggcttcacagcgggactcgtgtccgtctctggagcgaggacgggctggag
gccgaggtggtgggcctggaccacaacggcttcctccaggtgcacaacaaggagcagggc
gtggtctccgtggaacccgacggcaactccttcgacatgctgaagaacctggtggtcatc
aagcagcgttag
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