Pungitius pungitius (ninespine stickleback): 119218242
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Entry
119218242 CDS
T07626
Symbol
psen2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119218242 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119218242 (psen2)
Peptidases and inhibitors [BR:
ppug01002
]
Aspartic peptidases
Family A22: presenilin family
119218242 (psen2)
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
119218242
NCBI-ProteinID:
XP_037328419
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Position
9:21508244..21514185
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AA seq
431 aa
AA seq
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MNASESEEDSYDERTALVPSENPALPSYKPQEDLNPPVDLSTKRVKSGVSRRAGAAPVDG
GSDQEVDVDEEELTLKYGAKHVIMLFIPVTVCMLVVVATIKSVSFYAEKTNQTLIYTPFT
ENTSSVGRRLLNSVLNTIVMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMLLFWLSS
MYLSEVFKTYNLAVDYPTVVVIIWNFGAVGMICIHWKGPLQLQQAYLILISALMALVFIK
FLPEWSAWLILGAISVYDLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMMWTVGMA
SPPDAQRSGRETDEEAEQSSRGAEPEDPQSQLFPEDDLEEDRGVKLGLGDFIFYSVLVGK
AAAMGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFSTDFLVQPF
MDNLVAHQFYI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctcggagagcgaggaggactcctacgatgagaggacggcgttggtcccatct
gagaacccggcgctaccctcctacaaaccgcaagaggacctaaacccccccgttgacctc
tccaccaaaagggtaaagtctggggtcagcaggagggcgggggcggcccccgtggacggc
ggctcggatcaggaggtggacgtggacgaggaggagctgactctgaagtacggagccaag
cacgtcatcatgctcttcatccccgtcaccgtgtgcatgctggtggtggtcgccaccatc
aagtcggtcagcttctacgcggagaagaccaaccagacgctgatctacacgccattcaca
gagaacacatcgtctgtcggccgccggctcctcaactccgtcctgaacaccatcgtcatg
atcagcgtcatcgtagtcatgaccatcttcctggtggtgctctacaagtatcgctgctac
aagttcatccatggttggctcatcctgtcgtccctcatgctgctcttctggctcagctcc
atgtacctgagcgaggtgttcaagacgtacaacctggctgtggactacccgacggttgtg
gtgatcatctggaactttggtgcggtggggatgatctgcatccactggaaggggcccctg
cagctgcagcaggcctacctcatcctcatcagcgccctcatggccctcgtcttcatcaag
ttcctgcccgagtggtcggcctggctcatcctgggggccatctccgtctacgacctggtg
gccgtcctgtcccccaaaggtcctctccggatgctggtggagacggctcaggagcgcaac
gagcccatcttccccgccctcatctactcctccgccatgatgtggacggtcgggatggcg
agtccgccggacgcgcagcgctcaggacgggaaacggacgaggaggcggagcagagcagc
aggggggcggagcctgaggacccgcagtcccaactgttcccagaagacgacttggaggag
gaccgaggagtgaaactgggcctcggggacttcatcttttacagcgttctggttggtaaa
gctgcagcgatgggcggagactggaacacgacgctggcctgctttgtcgctattcttatc
ggtctgtgcctcactctgctgctgttggccatctttaagaaggctctgcccgctctgccc
atctccatcaccttcggcctggtcttctacttctccactgacttcctggttcagcccttc
atggacaacctggttgctcaccagttttacatctga
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