Pungitius pungitius (ninespine stickleback): 119218711
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Entry
119218711 CDS
T07626
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04144
Endocytosis
ppug04145
Phagosome
ppug04218
Cellular senescence
ppug04514
Cell adhesion molecules
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119218711
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119218711
04145 Phagosome
119218711
09143 Cell growth and death
04218 Cellular senescence
119218711
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119218711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119218711
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
119218711
Exosome [BR:
ppug04147
]
Exosomal proteins
Proteins found in most exosomes
119218711
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
Antigens
119218711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
MHC_II_beta
Phage_holin_2_4
DUF6377
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
119218711
NCBI-ProteinID:
XP_037329208
LinkDB
All DBs
Position
17:4439674..4484355
Genome browser
AA seq
365 aa
AA seq
DB search
MRRLGAQSSVLALLMISLHAAAPRIHSLKYFYTASSGVPNFPEFVSVGLVDEVEFLHYDS
NTRRAEPRQAWMSRVTEKDPQYWERNTENFMGHQHVSKGHIETAKQRFNQTGGVHIYQRM
CGCEWDDETNKVVKVYYQDGYNGEDFISFDLQTEQYIAPQQQAVITKQKLDHNRAKIAQE
KNYLTQICPEWLKMYVNFGRSSLMRTERPSVSLLQKTPSSPVSCHATGFYPDSATLFWRK
DGEELHEDVDLGEVLPNHDGTFQMRVDLKLSSVPAEDWRRYECVFQLSGVDEDMVTKLDK
TRTNTEKPAGFTFIIIIAAVAVLGLIAAVVGFLVYKRNRNAKRSSDKLRSSTEGSELSEE
LNPKA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtctcggtgcgcagagctcggttctggctctcctgatgataagccttcacgcc
gctgcaccacggattcactctctgaagtatttctacactgcgtcctctggagtcccaaac
ttcccagagtttgtgtctgttgggctggtggatgaagtagagttccttcactatgacagt
aacaccaggagagcagaacccagacaggcctggatgagcagagtcacagagaaggatcct
cagtactgggagaggaacactgagaactttatgggccaccagcacgtcagcaaaggccac
attgaaacagcaaaacaacgcttcaaccaaactggaggtgtccacatttaccagaggatg
tgcggctgtgaatgggatgatgagaccaacaaggtggtcaaggtttattatcaggatggt
tataatggagaagacttcatatcatttgacctgcagacagagcaatatattgctcctcaa
cagcaggctgtcatcaccaaacagaagttagatcataacagagctaagatagcacaggaa
aagaactacctgactcagatttgtcccgagtggctgaagatgtacgtgaacttcgggagg
agctctctgatgagaaccgagcgtccctcagtgtctctcctccagaagactccctcctct
ccagtcagctgccacgctacaggtttctaccccgacagcgccaccctcttctggaggaaa
gatggagaggagctccatgaggacgtggacctcggagaggtcctccccaaccacgacggc
accttccagatgagggttgacctgaaactgtcctccgtccctgctgaagactggaggagg
tacgagtgtgtgttccagctgtctggtgtggacgaggacatggtcaccaaactggacaag
accaggaccaacacggagaaacctgctggcttcaccttcatcatcatcatcgctgctgtg
gctgttcttggcctcatcgctgctgtggttggattcttggtgtataagagaaataggaac
gccaaacgctcttcagacaaactccgttcttctactgaaggctctgaactctctgaggaa
ctgaatcctaaagcttga
DBGET
integrated database retrieval system
