KEGG   Pungitius pungitius (ninespine stickleback): 119218814
Entry
119218814         CDS       T07626                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010  MAPK signaling pathway
ppug04060  Cytokine-cytokine receptor interaction
ppug04150  mTOR signaling pathway
ppug04210  Apoptosis
ppug04217  Necroptosis
ppug04350  TGF-beta signaling pathway
ppug04620  Toll-like receptor signaling pathway
ppug04621  NOD-like receptor signaling pathway
ppug04622  RIG-I-like receptor signaling pathway
ppug04625  C-type lectin receptor signaling pathway
ppug04920  Adipocytokine signaling pathway
ppug05132  Salmonella infection
ppug05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119218814 (tnfa)
   04350 TGF-beta signaling pathway
    119218814 (tnfa)
   04150 mTOR signaling pathway
    119218814 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    119218814 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119218814 (tnfa)
   04217 Necroptosis
    119218814 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    119218814 (tnfa)
   04621 NOD-like receptor signaling pathway
    119218814 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    119218814 (tnfa)
   04625 C-type lectin receptor signaling pathway
    119218814 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    119218814 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119218814 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119218814 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ppug04052]
    119218814 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:ppug00536]
    119218814 (tnfa)
Cytokines and neuropeptides [BR:ppug04052]
 Cytokines
  Tumor necrosis fators
   119218814 (tnfa)
Glycosaminoglycan binding proteins [BR:ppug00536]
 Heparan sulfate / Heparin
  Cytokines
   119218814 (tnfa)
SSDB
Motif
Pfam: TNF POTRA_TamA_1
Other DBs
NCBI-GeneID: 119218814
NCBI-ProteinID: XP_037329424
LinkDB
Position
17:6091581..6095499
AA seq 236 aa
MQGKCKVLVDATDHTVRRETMRVNPSSKQTTALLVFILCLAAAASVVLLFSRHAKVQGQD
EDNFGNRHTLRQMANVRAAIHLYGYYNSSVKSSAEWKNKVDQSHSQGGLELKNNQIVIPQ
NGLYFVYSQASFRVNCSSRDADDASSQPIVHVSHTVKRWSKSLGDKDWTILHSIRSVCQM
KASINSGEEENWFSSVYMGAVFNLMKGDRLKTVMEEKMLQGLEDESGKTFFGVFAL
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcaagggaaatgcaaggttctagtcgacgcaactgaccacactgtcaggagggaaacc
atgcgagtcaacccgagctccaaacaaaccaccgccctgctggtgttcatactctgcctc
gcggctgctgcttctgttgtccttctcttctccagacatgccaaggtccaaggacaagat
gaagacaattttggtaatcgtcacacattacggcagatggcaaatgtgagagcagccatt
catttatatggatactacaactcttctgtgaaatcctcagcggaatggaagaataaggtg
gaccagtcccattctcaaggagggctagaactcaagaacaaccaaattgtcattcctcaa
aatggcctctactttgtttacagccaagcgtccttccgggtcaattgcagcagcagggat
gccgatgacgccagttcgcagccaattgtgcacgtgagtcacactgtgaagcgctggtcc
aagtcattaggggataaggactggaccatcctgcactccatccgcagtgtatgccaaatg
aaagccagcataaattcaggtgaagaggagaactggttctcatctgtttacatgggagct
gtgttcaacctgatgaaaggggacagactaaagaccgtgatggaagagaagatgctgcag
ggcttggaggacgagtcagggaagacattctttggtgtctttgctttgtga

DBGET integrated database retrieval system