KEGG   Pungitius pungitius (ninespine stickleback): 119220154
Entry
119220154         CDS       T07626                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03420  Nucleotide excision repair
ppug04110  Cell cycle
ppug04114  Oocyte meiosis
ppug04120  Ubiquitin mediated proteolysis
ppug04141  Protein processing in endoplasmic reticulum
ppug04310  Wnt signaling pathway
ppug04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119220154 (rbx1)
   04120 Ubiquitin mediated proteolysis
    119220154 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119220154 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119220154 (rbx1)
   04350 TGF-beta signaling pathway
    119220154 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119220154 (rbx1)
   04114 Oocyte meiosis
    119220154 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppug04121]
    119220154 (rbx1)
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119220154 (rbx1)
Enzymes [BR:ppug01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     119220154 (rbx1)
Ubiquitin system [BR:ppug04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   119220154 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     119220154 (rbx1)
   Cul2 complex
     119220154 (rbx1)
   Cul3 complex
     119220154 (rbx1)
   Cul4 complex
     119220154 (rbx1)
   Cul7 complex
     119220154 (rbx1)
   Cul8 complex
     119220154 (rbx1)
   Cul9 complex
     119220154 (rbx1)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119220154 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119220154 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 119220154
NCBI-ProteinID: XP_037331781
LinkDB
Position
12:complement(12420362..12422458)
AA seq 108 aa
MAAAMDVDTPSGASSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgttgatacgccgagtggcgcaagcagtggagctagcaaaaag
cgatttgaagttaaaaagtggaatgctgtggcgctgtgggcctgggacattgtggtggat
aactgtgccatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcgacctctgaggagtgcactgtggcctggggtgtttgcaaccatgccttccac
ttccactgtatttcccgttggctgaaaaccagacaggtgtgtcctctggacaatagggag
tgggagtttcagaaatacggacactag

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