Pungitius pungitius (ninespine stickleback): 119220927
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Entry
119220927 CDS
T07626
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00514
Other types of O-glycan biosynthesis
ppug04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119220927 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119220927 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppug01003
]
119220927 (lfng)
Enzymes [BR:
ppug01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
119220927 (lfng)
Glycosyltransferases [BR:
ppug01003
]
Glycan extension
O-Glycan
119220927 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
119220927
NCBI-ProteinID:
XP_037333161
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All DBs
Position
12:2353209..2359836
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AA seq
374 aa
AA seq
DB search
MLMSSYKKTAVSVGSAACVCLLLLLLSLVAVQHHRVQVGDAPADGGDAGTRSLLQDAAPG
GERDAPTKKGFSAYFTKLTRGRREVERPAGSPATGADPPPAEDISADDVFIAVKTTKKFH
QSRLSLLLDTWISRNMQQTYIFTDGEDVELKKKIGGHAINTNCSAAHSRQALSCKMAVEY
DKFIESGKKWFCHVDDDNYVNVRTLVRLLSQYPHTQDAYIGKPSLDRPIEATERLGDNKM
KPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESVLGVPL
TRSNLFHSHLENLQQVSRSEIHKQITLSYGMFENKSNIIHFKGAFPVEEDPSRFRSVHCL
LHPDTPWCPPQVAF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgagcagctacaagaagacagccgtctccgtgggcagcgcggcgtgcgtctgc
ctgctgctgctgctgctgtcgctcgtcgccgtgcagcatcaccgcgttcaggtgggggac
gcgccggccgacggaggggacgcggggacgcgctctttgctccaggatgccgcgccgggg
ggcgagcgggacgcgccgaccaagaagggattctccgcgtacttcaccaagctgacgcgg
ggacgcagggaggtggagaggcccgcgggctccccggcgaccggcgccgacccgcccccg
gccgaggacatcagcgccgatgacgtcttcatcgccgtgaagaccaccaagaagttccat
cagtccaggctgagtctgctcctggacacgtggatctccaggaacatgcaacagacgtac
atcttcacagacggagaggatgtggagctcaaaaagaaaattgggggtcacgccatcaac
acaaactgctcggcagctcacagccgccaagcgctctcctgcaagatggcggtggaatac
gacaagttcatcgagtcggggaaaaagtggttctgtcacgtggacgacgacaactacgtg
aacgtccggactctggtgaggctcctgtcccagtacccccacacccaggacgcgtacatc
ggtaaacccagtctggaccggcccatcgaggccacggagaggctgggggacaacaagatg
aaaccagtcaacttctggttcgctactgggggagcgggcttctgcgtgagccgaggtctg
gcgctgaagatgagcccgtgggccagcggcggccacttcatgaacacagccgagaagatc
cggctgcccgacgactgcaccgtgggctacatcatcgagtcggtcctgggggtccctctg
acccgcagcaacctgttccactcccacctggagaacttgcagcaggtgtccagatcggag
atacacaagcagatcaccctcagttatgggatgttcgaaaacaagagtaacatcatacat
ttcaaaggggcttttcctgtggaggaggacccatcgaggttcaggtctgtgcactgtctc
ctgcacccagacaccccgtggtgcccccctcaggttgccttctag
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