Pungitius pungitius (ninespine stickleback): 119222062
Help
Entry
119222062 CDS
T07626
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
119222062 (plxnd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
119222062
NCBI-ProteinID:
XP_062418680
LinkDB
All DBs
Position
1:15703609..15747993
Genome browser
AA seq
1895 aa
AA seq
DB search
MPPSIAIAALLLGALALETRRGASALRVQQAFASPNRTNNFAVDPVSRRVYLAAVNAVYQ
LNGTLGVEAERSTGPVEDNLLCHAPQLPQAPCEHPKSLTDNHNKLLKLDREQGVVLVCGS
VYQGFCELRRMENISRIAVEFPHHGEKTVFPSMLNIAANHPNASTVGLIFKSHGGSTRLL
VGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRALNINDLSRLFTYDINPSEDNVFKIKQ
DVKTKNKLNFVHAFALKTYSYIAFNNDAKVGHKESQPNSILARICLDTESPRKPSGPESR
KLTESYIQMPLQCGSNGDIYNRLLSVYPAEIQARDGRGSEPYLFGVFTKADRKSALCAFK
FGDIDEEIRRGRRNCSNSPSSDVQVLDSVIQGSGAACVQKGNLVLQPDQLDCGAAHLQHP
LALRRSLRAAPLVEYTGLSSVSVDNVHNHTVVFLGTSSGRLRKLTLLPNMTVANQWTLKL
PASEPVHHIMTFDPNDSNFLYLMTSHHMLRVRVADCDQWRSCGDCLGAGDAHCGWCTLES
RCTIQKECARGLQARSWISMGDGLQQCPTMTLTPPEISIAADIKDVGILINGSVPDLAGS
RVECEYGPGVSTAATVHLDYGPAQIQTCPLLPRESYRPTPPGADHLTVSVAIKVNGTSVV
SGSLVIYDCERTGAIHLKTPCVSCLSTKWKCYWDPENHLCVSGKDESNTDLLENAVSCPI
LVASEVPPSPSQMAQDFTLSLRNVQEGEHLQCDFGTEQRYEAEWLDGSTVKCSGVTLSTS
QERQVFHLSLRRGGHSGGQARDVFVDSPQPMRVEVYNCAVGSSDCSQCWGREDQGHLCGW
CENSCRPRDDCQPVVDQCPPPDILKVSPLRGPVGGGTLLTVHGRNLGRRAGAVTASIGDV
PCVVQFFTVSVELVCLTGPSEQERTDVVQVDVHQSGTGTSSDSFSYLVPRLLSLEPTRGP
RAGGTVVVIRGENLGIGSRVRVLVNGTLECAVTDKTEETIVCTMPPASQAHADSVAVCVV
FENHACQSAELSAVYAYEKNPAISFIHPKKSYLSGGRTITVTGQGFDLVQSVTMEVLEIG
EKRCTVVSSFTITCPSPASSQSQQASVQFILNGVLYTGDRPFISDSEEEEGEPHGGHFLL
EYVEDPQFFTASKEKLIKHHPGEPLTLIINKGPSDLDLVPEEYSVMIGSHPCNISFHNDQ
LFHCTISGLLGSNEGELPVTVQVGNFHRTIAKVQLGGSELAIVVSIVVCCVLLLLCTVAL
VVYCTKSRRAERYWQKTLVQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIPFLE
YKQFVTRTFFPKMCSDYERSLVQPAYENDGLGPRALPETHPLLQDWKASDTTRPNVEEGI
TLFSTLLNNKHFLVTFVHAMEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKDLLVDL
IDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIRQQINKGSI
DAITGKARYTLNEEWLLRENIEAKPQNMSVSFQGCGMDSLPVRVMNTDTICQVKEKILEA
FYKNLPFSQWPRAEDVDLEWFDSGSNSKVLQDLDNSSVMEDGRKKLNTVFHYQIPEGASL
AMSMKDKRDNTLGRVKDLDTEKYVHLVLPHDDLMENKRSHRQSHRKKVLPEIYLTRLLST
KGTLQKFLDDLFQAILSIPPERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNSLPLR
FWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPE
YKKRVQCYYQQIQEMAPLSEQEMNAHLAEESRKHRNEFNTNLALTEIYKYAKRYRHQVVT
ALESNPTARRTQLHHKFEQVIALVEDNIYECCSEA
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcgatagcgatcgctgccctgctgctcggcgccctggccttggagacgcgc
cgcggtgccagcgcgctgcgcgtccaacaggcgttcgcgtccccgaatcgcaccaataac
ttcgcggtggaccccgtgtcgcggagggtctacctggccgccgtcaacgccgtctaccag
ctgaacggcaccctgggcgtggaggcggagaggagcaccggcccggtggaggacaacctg
ttgtgccacgcgccccagctgccccaggccccgtgcgagcatcccaagtccctcaccgac
aaccacaacaagctgctgaagctggaccgggagcaaggggtggtgctggtgtgcggctcc
gtgtaccagggcttctgcgagctgcggagaatggagaatatctcgcggatcgcggtggag
ttcccgcaccacggcgagaagacggttttccccagcatgctcaacatcgccgccaaccac
ccgaacgcctccaccgtggggctcatcttcaagagccacgggggcagcacccggctcctc
gtcggggccacctacacgggggccggaacccagtttttccccaagaaccacagcaaggag
gacctgcgctttgaaaacaccccggagatcgccatccgcgcgctgaacatcaatgattta
tcccgacttttcacctacgacatcaacccgtcggaggacaacgtgttcaagatcaaacaa
gacgtgaagaccaagaacaaactgaacttcgtccacgcgttcgcgctcaagacttattcc
tacatcgccttcaataacgacgccaaggtgggccacaaggagagccagcccaacagcatc
ctcgcccgcatctgcctggacaccgagagcccccggaagcccagcgggccggagagcaga
aagctcacggagtcctacatccagatgccgctgcagtgcggctccaacggggacatctac
aaccggctgctgtccgtgtaccccgcggagatccaggcgcgggacgggcgcggctcggag
ccctacctgttcggggtgttcaccaaggcggacaggaagtccgcgctgtgcgccttcaag
ttcggcgacattgacgaggagatccgacgagggcgccgcaactgctccaactcgcccagc
agcgacgtgcaggtgctggacagcgtcatccagggctccggggccgcctgcgtccagaag
gggaacctggtgttgcagcccgaccagctggactgcggcgcggcccacctgcagcacccc
ctggccctgcggaggtccctgagggccgccccgctggtggaatacacgggcctcagctcg
gtgtccgtggacaacgtgcacaaccacaccgtggtcttcctggggaccagcagtggacga
cttcgtaagctcaccctcctgcccaacatgaccgtggccaaccagtggaccctgaagctg
cccgccagcgagccggtccaccacatcatgaccttcgaccccaacgacagcaacttcctc
tacctcatgacctcgcaccacatgctgagggtcagagtggcggactgcgaccagtggagg
agctgcggcgactgcctgggagccggcgacgcccactgcggctggtgcacgctggagagc
cgatgcaccatccagaaggagtgtgcccggggcctgcaggcccgctcctggatcagcatg
ggggacggcctgcagcagtgtcccaccatgaccctgacgcccccggagatcagcatcgcc
gcagacatcaaggacgtcggcatcctgataaacggcagcgttcccgatctggcagggtcc
cgggtggagtgcgagtacggccccggcgtttccacggccgccacggtgcacctggactac
ggccccgctcaaatccagacctgcccgctgctcccgcgagaaagctaccggccgaccccc
cccggcgcagatcatctgactgtctccgtggcgataaaagtgaacggcacgtctgtggtg
tctgggagcctcgtcatctacgactgcgagaggaccggagcgatacacctcaagacgcca
tgtgtgagctgtctgagcaccaagtggaagtgctactgggaccccgaaaaccacctctgc
gtctccggcaaagacgagtcaaacaccgacctgctggagaatgccgtttcctgtcccatc
ctggtggcctcagaggttcctccgtcgccgtcccaaatggcccaggacttcaccttgtcc
ctcaggaacgtccaggagggggagcacctgcagtgtgactttggcaccgagcagcgctac
gaggccgagtggctggacggctccacggtgaagtgcagcggagtgaccctgtccaccagt
caggagagacaggttttccacctcagcctgcggagggggggacactccggcggacaggcg
cgggacgtcttcgtggacagccctcagcccatgagagtggaggtgtacaactgtgcagtg
ggcagctcggactgctcccagtgctggggccgcgaggaccagggccacctctgcggctgg
tgcgagaacagctgcaggccgagggacgactgtcagccagtggtggaccagtgcccgccc
cccgacatcctcaaggtctcccccctgaggggtccggtgggaggaggaaccctgctgacc
gtacacggcaggaacctgggcaggagggctggagccgtaaccgcgtccattggagatgtg
ccgtgcgttgtgcagttcttcaccgtctctgtggagctggtgtgtctcactggaccctct
gagcaggagaggacggacgtggtccaggtggacgtgcatcagagtgggacggggacgtcc
agcgacagcttctcctacttagtcccgaggctgctgtcgctggagcccaccaggggcccc
cgggccgggggaaccgtggtcgtcatcaggggggagaacctgggcatcggctcccgggtc
agagtcctagtcaacggcacgctggagtgtgccgtcaccgataaaacagaggaaaccatt
gtgtgcacgatgcctccagcctcgcaggcgcacgcggactctgtggcggtgtgcgtggtg
tttgagaaccacgcgtgtcaaagcgcggagctcagcgccgtctacgcgtatgagaagaac
cccgccatcagcttcatccacccgaagaagagctacctgagtggtggcaggaccatcaca
gtgacaggccagggttttgatctggtgcagagcgtcaccatggaggtgctggaaattgga
gaaaaacgctgcacggtggtctcctccttcaccatcacctgcccgtcgccggcctccagc
cagtcccagcaggcctcggtgcagttcatcctgaacggggtcctgtacaccggcgaccgg
cccttcatctctgacagcgaggaagaggagggcgagccacacggaggtcacttcctgttg
gagtacgtggaggaccctcagttcttcactgcgagcaaggagaagctgatcaagcaccac
cccggagagcccctgacgctcatcatcaacaaagggccgagcgacttggatctggtgccg
gaggaatactccgtgatgattggctcccacccctgtaacatcagcttccacaacgaccag
ctgttccactgcaccatcagcgggctgctgggctccaacgagggcgagctgcccgtcacg
gtgcaggtggggaactttcatcggaccatcgccaaggtgcagctggggggcagcgagctg
gccatcgtggtgtccatcgtggtgtgctgcgtgctgctgctgctgtgcactgtggcgctc
gtggtgtactgcaccaagagccgaagggcggagcgctactggcagaagaccctggtccag
atggaggagatggagtcgcagatcagagacgagatccgaaaaggcttcgccgagctgcag
acggacatgacggacctgaccaaggagctgaatcgcagccagggtatccccttcctggag
tacaagcagtttgtcacccgcaccttcttccccaagatgtgctcggattacgagaggagc
ctggtgcagcccgcctacgagaacgacgggctgggcccgcgtgcgctgccggagacgcac
ccgctgctgcaggactggaaggcctccgacacaacgaggcccaacgtggaggagggcatc
accctgttctccacgctgctcaacaacaagcacttcctggtcaccttcgtccacgccatg
gagcagcagaaggacttcgcagtacgagacagatgcagcctggcgtctctgctcaccatc
gccctccatggtaagctcgagtactacaccagcatcatgaaagatctgctggtggacctg
atcgacgcgtcggcctccaagaaccccaaactgatgctgcgccgcaccgagtccgtggtg
gagaagatgctgaccaactggatgtccatctgcatgtacagctacctcaaggaaacggtg
ggcgagcctttcttcctgctgctgtgtgcgatcaggcagcaaatcaacaagggctccatc
gacgccatcacggggaaggcccgctacaccctcaacgaggagtggctgctccgcgagaac
atcgaggccaagccccagaacatgagcgtgtccttccagggctgcggcatggactcgctg
cccgtcagggtcatgaacacggacacaatatgccaggtgaaggaaaaaatcctggaagcc
ttttataagaaccttccattctcccagtggcccagagcagaggacgtggacctggagtgg
tttgactccggcagcaacagtaaggttctgcaggacctggataattcctccgtgatggag
gacggcagaaagaaactcaacactgtcttccattaccagatccctgagggggcatcgctg
gccatgagcatgaaagacaagagggacaacaccctggggagagtcaaagatctggatacg
gagaagtacgtgcacttggtcctgcctcatgacgacctaatggagaacaagaggtcacac
cggcagagccaccgcaagaaggtcctgcccgaaatctacctgacgcgcctgctgtctacc
aagggaactcttcagaagttcttggatgacctctttcaagccatcctcagcatccctccg
gaacgcccccctctggccatcaaatacttctttgacttcctggaggagcaggcggacaaa
cggggcatcaccgacccggacacgctgcacatctggaaaaccaacagtttgccgctgcgc
ttctgggtgaacatcctgaagaaccctcagtttgtttttgacatcgacaagacggatcac
atggacgcctgtctgtccgtcatcgctcaggccttcatagacgcctgctccatttctgac
ctgcagctcggaaaggactcccccaccaacaagctgctgtatgccaaggagatccccgag
tacaagaagagggtgcagtgctactaccagcagatccaggaaatggcgccgctcagcgag
caggagatgaacgcccacctggccgaggagtccagaaagcacaggaacgaattcaacacc
aacctggccttgaccgagatctacaagtacgccaagagatacagacaccaggtggtgacg
gctctggagtccaaccccacggcgcgtcgcacccagctgcaccacaagttcgagcaggtc
atcgccctcgtggaggacaacatctacgagtgctgcagcgaggcctga
DBGET
integrated database retrieval system
